Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0982 |
Symbol | |
ID | 5081795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1093717 |
End bp | 1094478 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498107 |
Product | hypothetical protein |
Protein accession | YP_001182510 |
Protein GI | 146292086 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.109631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTACGCTG ATACTCAAAA TGATATTACT CGGCAGGTTG TGCGTGTTGC ACAACTGCTA CTGGCCTATG GCGCTGAATC TGATCTCGTT GAAGAAATCA GTCAGCGTTT AGGCCAGGCT TTAGGCCTTG CTAGCGTAGA GCTTTCTATT TCCTCAAATT CCCTCGTCTT GACCAGTTTG GTTCATGGCC GCTGTATTAC TACTACCCGT CGAATTCGTG AACATGGCAT CAATATGACC ATAGTGTGTG AATTGCAGCG GATCTGCTTA TTAGCTGAAA AAGGGCTTTA TGGACCTAAT GAAGTTCGTA AACGTCTAGC TCGTATTGAG CCTAAAACCT ATCCACCTGC TTTAGTTGTG TTAATGATAG GGCTGTCCTG TGCCAGTTTT TGCCATCTCT TTAATGGTGA TTTAGCCGCG TGTGTGATCA CTTTTTTTGC TTCTGCGGTA GGCATGTCCG TTCGTTTAGC GATTGCCAAA CGCCATTTTA ATTTATTGGT GAATTTTGCT ACGACTGCAT TTGTGATTAG TATGATTGCG CAAACAGGTT ACGTATTTTC ACTCAGTGAA ACACCACAGT CGGCAATGGC GGCGAGTGTG CTCATGTTGG TGCCCGGTTT CCCTATGATT AATGCGATTT CCGATATGGT GAAAGGCCAT ATGAACGTGG GGATTTCACG CTGGGGGCAT GCAACACTGT TGACTGTATC GTCTGTGATT GGCATAACCA TTGCCATGCA GCTTGGTGGT ATCTTTCTAT GA
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Protein sequence | MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL VHGRCITTTR RIREHGINMT IVCELQRICL LAEKGLYGPN EVRKRLARIE PKTYPPALVV LMIGLSCASF CHLFNGDLAA CVITFFASAV GMSVRLAIAK RHFNLLVNFA TTAFVISMIA QTGYVFSLSE TPQSAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI GITIAMQLGG IFL
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