| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0978 |
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| Symbol | |
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| ID | 5081791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1090480 |
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| End bp | 1091475 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498103 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_001182506 |
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| Protein GI | 146292082 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000234439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCCAC AACCAGAGTC TATTATGGAT TTAAACGCTA TTCGTCAACT GGCTGACACT
GATATGCAAG CAGTCAATCA GCTGATATAT AAACAGCTTG AGTCAGATGT CGCCCTGATC
AACCAGCTAG GTTTCTACAT TATCAATGGT GGCGGTAAGC GTCTTCGTCC TTTACTGTCA
GTGCTTGCTG CACGTACGGT AAGCTACGAA GGTGATGCAC ACCTCAAGCT CGCGGCTATC
ATTGAGTTTA TCCATACCGC CTCATTACTC CATGATGATG TTGTTGATGA ATCGACACTT
CGCCGTGGGC GCGAAACCGC GAACGCCCTA TTTGGAAACA GTGCAAGTGT GCTTGTGGGT
GATTTCCTTT ACACGCGCTC ATTTCAGATG ATGACAGAAC TCGATAATAT GAGAGTGCTG
CGGGTCTTAG CGGATACGAC CAACGTACTG GCTGAGGGTG AAGTATTGCA ATTAATGAAT
TGCAACGATC CTGACACCAC TGAAGAAAGC TATATGCGTG TCATTTACTG TAAAACAGCT
AAGTTATTTG AAGCGGCGAC CTTGCTTGCA GCAGTATTAG CGGGAGCAAG CACTGAGCAG
GAAACCGCTC TTGGTAATTA TGGGAAATAT CTCGGAACCG CTTTTCAATT AACTGATGAT
TTGCTCGATT ACACCGCTGA TACTGAAGAG TTAGGAAAGA ATATTGGTGA TGATCTCGCC
GAGGGCAAAC CGACGCTACC TTTAATCTAC GCCATCGCCC ACGGCACCAA TGAGGAAAGG
CAACTTATTC GCCAAGCCAT TGAGCAAGGT GATGGTACGC AGGCAATTGA TAAAATTGTG
GCCGCATTAC ATCACTGTGG TGCATTAACC TACACTCAGC AAAAAGCGAT TGAAGAATCG
GAAAAAGCCA TTGCAGCACT GGATGTATTG CCAGATAGCG AATTTAAAGA GGCTTTAGTG
TCACTGGCTA AAATATCAGT TGATCGCAAT CATTAA
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| Protein sequence | MAPQPESIMD LNAIRQLADT DMQAVNQLIY KQLESDVALI NQLGFYIING GGKRLRPLLS
VLAARTVSYE GDAHLKLAAI IEFIHTASLL HDDVVDESTL RRGRETANAL FGNSASVLVG
DFLYTRSFQM MTELDNMRVL RVLADTTNVL AEGEVLQLMN CNDPDTTEES YMRVIYCKTA
KLFEAATLLA AVLAGASTEQ ETALGNYGKY LGTAFQLTDD LLDYTADTEE LGKNIGDDLA
EGKPTLPLIY AIAHGTNEER QLIRQAIEQG DGTQAIDKIV AALHHCGALT YTQQKAIEES
EKAIAALDVL PDSEFKEALV SLAKISVDRN H
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