| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0976 |
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| Symbol | |
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| ID | 5081789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1089026 |
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| End bp | 1089568 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498101 |
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| Product | pilin, putative |
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| Protein accession | YP_001182504 |
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| Protein GI | 146292080 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0485556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGATCAA AATACCCACA AGCAGGTTTT ACCTTAATAG AACTCGTGGT CGTAATCCTA
TTGCTTGGCA TTCTCGCTGT CGTGGCGTTA CCCAAATTCG TTAACATACA ACAGGACGCA
CAAATAGCCA GCGTAAAAGC GAGTGCAGGA GGTTTTAAAA CGGGGCTCAA TTTGGCTCGT
TCTGTATGGG CAGTAAAAGT AGGTTCAGGT CCAAGCGAAG ATTTACCAGT ATTTGGTACA
GCACAGTCTG AACAAGTCGA TTTCAACGCT TTTGGCTGGC CTGCCCAGCA CTATATTTAC
GGCAATGAAG CCTCACCCGT ATTGGATAAC GTAGAAGACT GCGTTTCTGT ATGGCAAGTG
CTGTTTCAGA ATGCACTACC TAGCGTTTCG CGTTTAAATA TTGATGCCGA TGACACCGAT
TATAAAGCCA GTTACATCTC CCCTAGTCAG TGTAAATATT CCTATCGAGC TAATGACAAA
TTGGCCGTTT ACTATGACTC CCGCGATGGA ACCGTTACGA CCGACTTAGA TCCCAATAGT
TGA
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| Protein sequence | MRSKYPQAGF TLIELVVVIL LLGILAVVAL PKFVNIQQDA QIASVKASAG GFKTGLNLAR
SVWAVKVGSG PSEDLPVFGT AQSEQVDFNA FGWPAQHYIY GNEASPVLDN VEDCVSVWQV
LFQNALPSVS RLNIDADDTD YKASYISPSQ CKYSYRANDK LAVYYDSRDG TVTTDLDPNS
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