| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0972 |
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| Symbol | |
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| ID | 5081785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1085486 |
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| End bp | 1086952 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498097 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001182500 |
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| Protein GI | 146292076 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.699188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGA CCCCCTCCCC TAAAGAACCA TTAGACAAAC ATTTTCTGCC GGAAAATCAG
TTGCTACTCA ATGCCGTGGG TGAAGGTATT TATGGTTTTG ATTTAAATGG AAATGCCGTT
TTTATCAATC CAGCAGCTGA ACGGATGACA GGCTGGAAAA ATGCAGAGTT ACTGGGCAAA
AATATCCATA ATTGCCACCA TCATAGCCAT GCGGATGGCA GCCATTATCC CCAAGAAGAT
TGTCCAATTT ACAATACCTT AAAGGATGGT ATCACCCGCG AGATCACCCA CGATGTGTTT
TGGCGTAAAG ATGGTAGCAG CTTCCCAGTG CATTACAGCT CTACTCCTGT TTATCGAGAC
AATCAACTTA TTGGCGTAGT CGCGATATTT CGTGACATTA GTATTCAAAA ACAAACTGAG
CACTCATTAC GCCAAGCCTT AATCCAAGTG CAAGCACTAT CCGAACGTCT TGCATCAGAA
AATCACTACC TGCAAGCCGA ATTAGCAGAT AAAACAGGTG ATGTGGATAT TTCTGGTAAT
AGCAGTGTTA TCCGCCACAT GATCCAGCAA CTACACATGG TTGCCAACAC CGACAGTACA
GTGTTGATTT GTGGTGAAAA TGGCACAGGA AAAGAATTAG TTGCCCGCAA CTTACACAAA
CTCAGTCACC GCAAAGATAA ACCTATGATC AGCGTTAACT GTGCCGCCTT CTCAGCCTCT
TTACTGGAAA GTGAACTCTT TGGTCACGAA AAAGGAGCAT TTACCGGTGC CACCAGCCGC
CGAAAAGGTC GATTTGAACT TGCACATCAG GGAACGCTGT TCCTCGATGA AGTCGCAGAA
CTCAGTTTGG AAGCCCAATC AAAATTACTA CGAGTTATTC AAGAGCAATC CTTTGAACGT
CTCGGCGGTA GTGAAACCAT CCAAGTGGAT ATTCGCTTAG TCGCAGCCAG CCACCATGAT
TTACTCAAAC GAGTCGAGCT GGGATTATTT CGTATGGATC TCTATTACCG TTTGAATGTA
TTCCCAATTA AAGTTCCGCC ACTCCGATCG AGGCTGGATG ATATCCCCGA ACTAGTCAGC
CATATACTCC ATAACTTGAA TCGAAAACTG GGTAAAAAAA TCCGCGGGGT CAGTCAAAAA
GGCCTACAAA AACTGATGGC CTACACTTGG CCCGGCAATG TACGTGAGCT ACAAAATATC
CTTGAGCGTG AAGCAATTCT TACCCAAGGA GATATTTTAC ACATCCATGC AATGCCAACC
GATAACCTAA ATGCGCCACA TTTATCACTG CAGCATCAAA CCCTAGCTGA AGCAGAAGCA
TGGCATATAG AACAAACACT TAAACGCTTA AATTGGCGTA TATCAGGGCC TTCTGGCGCA
GCTAATATCT TAGGGGTACC GCCGAGCACG CTCAGATCGC GGATGAAAAA ATTGGGGATC
CAACGTCAAA TGAATGAAAC GAATTAG
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| Protein sequence | MTKTPSPKEP LDKHFLPENQ LLLNAVGEGI YGFDLNGNAV FINPAAERMT GWKNAELLGK
NIHNCHHHSH ADGSHYPQED CPIYNTLKDG ITREITHDVF WRKDGSSFPV HYSSTPVYRD
NQLIGVVAIF RDISIQKQTE HSLRQALIQV QALSERLASE NHYLQAELAD KTGDVDISGN
SSVIRHMIQQ LHMVANTDST VLICGENGTG KELVARNLHK LSHRKDKPMI SVNCAAFSAS
LLESELFGHE KGAFTGATSR RKGRFELAHQ GTLFLDEVAE LSLEAQSKLL RVIQEQSFER
LGGSETIQVD IRLVAASHHD LLKRVELGLF RMDLYYRLNV FPIKVPPLRS RLDDIPELVS
HILHNLNRKL GKKIRGVSQK GLQKLMAYTW PGNVRELQNI LEREAILTQG DILHIHAMPT
DNLNAPHLSL QHQTLAEAEA WHIEQTLKRL NWRISGPSGA ANILGVPPST LRSRMKKLGI
QRQMNETN
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