| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0970 |
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| Symbol | |
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| ID | 5081783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1081844 |
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| End bp | 1083445 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498095 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001182498 |
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| Protein GI | 146292074 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATACG ATCAAGACTC CCAACTCACA CTCAGCTATT CATCATTGGT CGATCTTATT
GAGAAAACCA GCTTACGTTA TGGTGATAAA CCCGCCTATG CTTGCTTGGG TAAAACCAGC
AGTTTTAACG AGATAGAGCG AGACTCCCGT TACTTTGCCG CCTATTTGCA AAACAAGACC
CAGCTCAAAC CTGGCGATCG TATTGCAATT CAATTACCCA ATATCACGCA ATTTGTTATT
GCAGCCTATG GTGCTATTAG GGCTGGGCTC ATTCTAGTCA ACACCAATCC TCTCTATACA
GAGCGCGAAC TTATCCATCA GTTTAATGAT TCAGGAGCCA AAGCCTTAGT TGTACTATCG
GATTTGCTGC CAACCTTAGC AAAAGTGGTC GCCACTACCG AGATTGAATT AGTTATCTCA
ACCCATGCTC TGGATTTAAT AGAGCCTCAA ATTCAGCCTA AAACGGGCCT GAAAAATATC
GCGTTCTGCG ATATTTTAAA GCAAGGCGCA GAACTGACCT TTACCCGCCT AGCGCCCACA
CTCGATGATC TCTGTGCATT GCAATATACA GGCGGTACAA CGGGATTATC TAAAGGAGCC
ATGTTGACCC ACGGCAATAT GCTCGCCAAT GCCGCGCAGG TAAAATCCCG CATTGGTAGC
GTGATATCTG AAGGTGAGGA TATTTTTGTT GCGCCGCTAC CGATTTACCA TATTTATGCG
TTTATGGTGA ACTTAGTGCT GTATTTTGAG TGCGGTGGTT GCTCGGTATT AATCCCAAAT
CCCCGGGATA TCAGTGGTTT AATTAAGACT CTCACTAAAT ATCCTTTTAC TGGTTTTGCT
GGGCTCAATA CCTTATTTGT CGCTCTGTGC CATCAGCCTG AATTTAAAGC ACTGGACTTT
AGCCATTTAA AAATTACCAT CTCAGGTGGT ACAGCGCTCA CGGCCGCGGC GGCCAATATT
TGGCAACAAA CCACGGGTAA TATGATCAGC GAAGGTTATG GATTATCTGA AACCTCCCCT
GTCATTTCAC TCAATGCGCC CGGTTATCAA AAGCTCGGCA CTATTGGTAA ACCTGTGATT
GGTACTGAGG TCAAACTATT AGATGAAAAT AACATTGAAG TACCTTTAGG GACTGCAGGA
GAATTAGCGG CGCGCGGCCC GCAGGTGATG CGAGGATATT GGAATAACCC ACAAGAAACC
GCCAATGTGA TGACACCAGA GGGCTTCTTT AAAACAGGCG ATATTGCCAT AGCAACGGCG
GAAGGTTTCC ATCAAATTGT TGATCGCAAA AAAGATATGA TCATCGTGTC AGGCTTTAAC
GTCTACCCTA ATGAAGTTGA AAATGTGCTT GCCAGTCATC CCGATATCAT TGAGTGCGCG
GTTGTTGGTG TACAAGATGA ACACTCGGGG GAAGCGGTCA AAGCCTTTAT CGTCCTCAAG
GACAATAACC TCAATCATGA ACAGGCTAAA AGTACAATTT TGCAGTATTG CCGCGAGCAA
TTAACGGGTT ATAAATTACC TAAAATCATT GAGTTTATGA CGCAATTACC TAAAAGCACC
GTCGGTAAAA TTCTGCGCCG CGAACTTAAA AATAAGGCTT AA
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| Protein sequence | MAYDQDSQLT LSYSSLVDLI EKTSLRYGDK PAYACLGKTS SFNEIERDSR YFAAYLQNKT
QLKPGDRIAI QLPNITQFVI AAYGAIRAGL ILVNTNPLYT ERELIHQFND SGAKALVVLS
DLLPTLAKVV ATTEIELVIS THALDLIEPQ IQPKTGLKNI AFCDILKQGA ELTFTRLAPT
LDDLCALQYT GGTTGLSKGA MLTHGNMLAN AAQVKSRIGS VISEGEDIFV APLPIYHIYA
FMVNLVLYFE CGGCSVLIPN PRDISGLIKT LTKYPFTGFA GLNTLFVALC HQPEFKALDF
SHLKITISGG TALTAAAANI WQQTTGNMIS EGYGLSETSP VISLNAPGYQ KLGTIGKPVI
GTEVKLLDEN NIEVPLGTAG ELAARGPQVM RGYWNNPQET ANVMTPEGFF KTGDIAIATA
EGFHQIVDRK KDMIIVSGFN VYPNEVENVL ASHPDIIECA VVGVQDEHSG EAVKAFIVLK
DNNLNHEQAK STILQYCREQ LTGYKLPKII EFMTQLPKST VGKILRRELK NKA
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