| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0966 |
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| Symbol | |
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| ID | 5081779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1076428 |
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| End bp | 1078518 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498091 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_001182494 |
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| Protein GI | 146292070 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.942987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA AGCCATTAGT CATAGCGATG GCGGTAGCGC TGAGTAGTTC GACGCTGAGT
TTTACATTAG CAGCCGAAGA CGTTACTAAG GCAGAGATTC AAGAGAGTGC CGATAAAGAA
CTGATTACTA CTGAGTTTGA TGAAGTCCTT GTGAGTGCGA CACGCATCAG TGAAAAAGCC
TCCGAAACTA GCCGTAGCGT GGCCGTTGTG GGTGAAGAAC AGCTTGCGAT TGCGCAAGCT
TCTTCTGTGG CAAATGCGCT TAAACATGAG GCCAATATTT CGCTGACTAA TGGCCCAAGA
GCTTCATCGC AAGGGGTTGA AATCCGTGGT TTAAGTGGCG ATAGAATTCT GCAAACGATC
GATGGTGCAA GGCAAAATAC CAGTTCAGGT CATAGGGGAA CATATTTTAT GGATCCTGAA
CTACTCAAAT CGGTTGAGGT ATTGCGTGGA CCCGCGAGTA GTTTGTGGGG GAGCGGTGCC
CTAGGTGGTG TAGTCGCCCA GAATACTAAG TCCGCAAAAG ACTTTTTAGC CCCAAATGAG
AAATTTGGTG GTTATCTTCA GCAGGGATAT GAAACCAATG GCGATCGCGT TAAAACCAGT
GGTGCCGTTT ATGGACAAGA AGGCACGATT GATTGGTTAC TCAATGGTTC CTATTTCGAT
TCAAATAATA TTAAAACTGG TAACGATGAA ACCCTGATCA ATAGTGCATC CGATGGTGGC
AGTGGTTTGG CTAAACTAGG TTGGCAAGCT GACGAGGCAT CACGGTTAGA ATTATCAGCA
AGGGTTAATA AAACCAACGA ATTAGTACCA AGTAATCCCT CTACTGTGGT CAGCAGTTCA
GTTCCCTTAG TTCGTCGCCA AACTGATGAT CAAAATATCA CGTTAAATTA TAGCCTTAAC
CCTACTAACA ACCCTTATTT GGACACTAAA GTACAAGTGT ATTGGAATAG TACGGACTAC
GACGAAGACC GCGTGACTAA GGGGCAAAAG GACAGTACTG AGTTTAGAAC CGTAGGCGTA
AATCTGAATA ACAGTTCGCG CTTAGGCAAT ACCAAGTTGA CCTATGGCGT TGATGGTTAC
CGCGATACCA TCGAAACCGT TCGTGACGAT AGCGGACAAG TCGGGCAGCG CCCCGGAAAC
ATTGATGGTG AAAGCACTGT TTGGGGAGCT TTTACCCGTG CAGATATTGA GTTGATTAAG
ACCCTCAACT TAGATGCCGC CCTGCGCTAT GACAACTTTA AAAATGACAG TAATAACCTC
AACATGTCAT CGGATGATAA TGAATTATCA CCTTCTCTTG GTTTGAGCTG GCAGACTCAA
CCTTGGTTAA CATTAAGTGC CCGCTATGAC CAAGCGTTCC GCGCGCCTAC GGTGGAGGAA
ATGTATTCCA GCGGGACGCA TTATTGTATT CCGCCTATCC CAGGATTCTT ACCCCAAGGT
CTGTGTAACA CCTTTGCGAC CAATCCGAAT TTAAAGCCTG AAACCGCTCG TAATAAAGAA
ATTAAAGCGG ACTTACGTTT TAGTGACTTG GCGGGTGATG ATGAACTGGC GGTGACCTTA
AACGTCTTCC GTAACGATGT TGACGACTTT ATTGTGCAGC AGGTTTCTAA CCCTTGGCGT
GGTATTCCGG GATTTGAGCA AACCACGTCA TGGAATAACG TCGAAGATGC TCGTTTAACG
GGTTTTGAAA TTAGTGGCCG TTATCGCATT GGTCAAACTC GTTTAGCCAT GAATTATGGT
CAAACCCATG GCGAAGATCG TAAGACAGGG GAATATATTG AAGGAATACC TGCCAATAAA
TTCAATGTCG ACTTATCTCA AGGCATTATG GATGGCGATA TGAAACTGGG CACCCGAGTC
ACCTATGTCG CCAGTCAGTC AAATACACCT GATGGATACA GTGTGGCGAA ATACGATGAT
TACAAACTGT GGGATATCTA CGTTGCATGG GAGCCTACTA TGGGGGTGAT GTCGGGTGTG
AGAGTGGATT TTGCCGTTGA AAATATCGGC GATGAACAGT ATCAACAGGC ATGGCAAACC
TTGTATCAGC CAGGGCGAAA TATGAAGTTA TCGGCGCGTT ATATGTTCTA A
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| Protein sequence | MKKKPLVIAM AVALSSSTLS FTLAAEDVTK AEIQESADKE LITTEFDEVL VSATRISEKA
SETSRSVAVV GEEQLAIAQA SSVANALKHE ANISLTNGPR ASSQGVEIRG LSGDRILQTI
DGARQNTSSG HRGTYFMDPE LLKSVEVLRG PASSLWGSGA LGGVVAQNTK SAKDFLAPNE
KFGGYLQQGY ETNGDRVKTS GAVYGQEGTI DWLLNGSYFD SNNIKTGNDE TLINSASDGG
SGLAKLGWQA DEASRLELSA RVNKTNELVP SNPSTVVSSS VPLVRRQTDD QNITLNYSLN
PTNNPYLDTK VQVYWNSTDY DEDRVTKGQK DSTEFRTVGV NLNNSSRLGN TKLTYGVDGY
RDTIETVRDD SGQVGQRPGN IDGESTVWGA FTRADIELIK TLNLDAALRY DNFKNDSNNL
NMSSDDNELS PSLGLSWQTQ PWLTLSARYD QAFRAPTVEE MYSSGTHYCI PPIPGFLPQG
LCNTFATNPN LKPETARNKE IKADLRFSDL AGDDELAVTL NVFRNDVDDF IVQQVSNPWR
GIPGFEQTTS WNNVEDARLT GFEISGRYRI GQTRLAMNYG QTHGEDRKTG EYIEGIPANK
FNVDLSQGIM DGDMKLGTRV TYVASQSNTP DGYSVAKYDD YKLWDIYVAW EPTMGVMSGV
RVDFAVENIG DEQYQQAWQT LYQPGRNMKL SARYMF
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