Gene Sputcn32_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0961 
Symbol 
ID5081774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp1071938 
End bp1072969 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content51% 
IMG OID640498086 
Producttransport system permease protein 
Protein accessionYP_001182489 
Protein GI146292065 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTTA ATCGCTGGCA AGTAACCCAT TGGCTCTGGC TTGGCCTAAC CATACTGTTA 
GGCTTAAGCT GCTTACTCTC AGTGAGCACA GGCCCAGTCA GTATCAGTTT AATCGATGCC 
CTGCGCGCAG TGGTCAATTG GGCGACCCAG CAAAATATCG GCAATATTGC GCCACATGAA 
CAACTTGTCA TCAATAATGT GCGTCTGCCA CGGACATTAC TGGCATTAGC CGTGGGAGCA 
ATACTTGCCC AATGTGGAGC TGTGATGCAG GGGTTATTCC GTAACCCCTT GGCGGATCCC 
GGCATTATCG GCGTATCATC TGGCGCAGCG CTTGGTGCCG CCATTTGTAT CGTGCTATTA 
CCCAACACCC ATCCCTTAAT GATCCCAATA AGTGCCTTTG TTGCTGGCTT AATAACAACG 
CTTGTTGTCT ATCGCCTTGC CAGTAGCCCA ACGGGAACCT CAGTCGTGCT CCTATTGCTT 
TCAGGTGTTG CAATAGCCGC ACTGGCTGGA GCGGGGATTG GTGTGCTCAC CTACCTTGCA 
AATGATATGG CACTTAGGGA TCTCACCCTC TGGCAAATGG GCTCGATTGC AGGAGCACAA 
TGGATATATG TCAGCCTGTG TGTGGCGACC TTAGTTTTTA TCAGTTGGCG ATTTTATCAA 
GATGCGAGGG CGCTAAATGC CTTGCTACTG GGGGAGGCTG AGGCTCGTCA TCTTGGGATC 
GATGTTGATA GGCTCAAACT TAGATTGATT TTACTCTGCG CACTCGGTGT GGGAGTTAGC 
GTCGCAGCAA CAGGCATTAT TGGCTTTATC GGTTTAGTGG TACCTCACTT GGTACGCATG 
ATACTCGGCC CAGATCATAG GCAACTCCTC CCGCTCAGCG CACTTTTAGG CGCCACCTTA 
CTGGCACTTG CCGATATTGG TGCCAGAGCG TTTTTACAAC CAGCGGAATT ACCCGTAGGG 
CTGGTCACAG CATTGCTTGG CGCGCCTTTC TTTATCTTTT TATTACTGCA ACAACGCAGT 
AAGTTAACCT AA
 
Protein sequence
MQLNRWQVTH WLWLGLTILL GLSCLLSVST GPVSISLIDA LRAVVNWATQ QNIGNIAPHE 
QLVINNVRLP RTLLALAVGA ILAQCGAVMQ GLFRNPLADP GIIGVSSGAA LGAAICIVLL 
PNTHPLMIPI SAFVAGLITT LVVYRLASSP TGTSVVLLLL SGVAIAALAG AGIGVLTYLA 
NDMALRDLTL WQMGSIAGAQ WIYVSLCVAT LVFISWRFYQ DARALNALLL GEAEARHLGI 
DVDRLKLRLI LLCALGVGVS VAATGIIGFI GLVVPHLVRM ILGPDHRQLL PLSALLGATL 
LALADIGARA FLQPAELPVG LVTALLGAPF FIFLLLQQRS KLT