Gene Sputcn32_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0945 
Symbol 
ID5081857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1054887 
End bp1056143 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content45% 
IMG OID640498070 
ProductNa(+)-translocating NADH-quinone reductase subunit F 
Protein accessionYP_001182473 
Protein GI146292049 
COG category[C] Energy production and conversion 
COG ID[COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 
TIGRFAM ID[TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0537088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTC TTGGTATTTT TAAATCTACT CCACTTGAGG TTTACCTCGG TGTGAGTATG 
TTTACTGCTA TCGTCCTGAT CTTGGTATTA GTGATTTTAT TCGCTAAATC TAAGTTAGTG
GCGAGCGGTG ACATCACGAT CGGTATTAAT GACGATCCTG AAAAAGCGAT AAAAACCGGT
GCGGGCGGCA AGTTATTAGG CGCTCTTGCC AATAACGGTA TTTTCGTATC GAGTGCATGT
GGTGGTGGTG GTTCTTGCGG CCAATGCCGT GTGGTGATTA AGTCTGGCGG CGGTGATATT
CTGCCGACTG AACTTGACCA CATCAGCAAA GGTGATGCCC GTAAAGGTTG TCGTCTTTCT
TGTCAGGTTA ACGTCAAAAA CGATATGGAA ATCGAGCTTG ACGAAGAAAT CTTCGGTATC
AAAAAATGGG AATGTACTGT TATCTCTAAT GATAATAAAG CCACTTTCAT TAAAGAACTG
AAGCTACAAA TTCCTGATGG CGAGTCTGTA CCATTCCGTG CGGGTGGCTA TATCCAAATC
GAAGCGCCAG CTCATCACAT TAAATATGCA GATTTCGACG TACCTGCACA ATACCGTGGT
GACTGGGAGC ACTTTGGTTT CTTCAATCTT GAATCTAAGG TTGATGAAGA AACGATTCGT
GCATACTCAA TGGCTAACTA CCCAGAAGAG TTCGGTATTA TCATGCTGAA CGTGCGTATT
GCTACGCCTC CACCACGTAA CTTGACACTG CCTTGCGGTA AGATGTCATC TTACATATGG
AGCTTAAAAG CGGGTGATAA AGTGACGATT TCTGGTCCAT TTGGTGAGTT CTTCGCGAAA
GATACCGATG CAGAAATGGT GTTTATCGGT GGTGGCGCGG GTATGGCACC AATGCGTTCG
CACATTTTCG ACCAACTTAA GCGTCTTAAA TCTAAGCGTA AGATGAGCTT CTGGTACGGT
GCGCGTTCTA AGCGTGAAAT GTTCTATGTT GAAGATTTCG ATGGTCTCGC GGCTGAGAAT
GATAACTTCG TATGGCATGT GGCGCTGTCC GATCCTCAAC CTGAGGATAA CTGGGATGGT
TATACTGGTT TCATCCATAA CGTACTGTAT GAAAACTACC TGAAAGACCA CGAAGCGCCT
GAAGATTGTG AGTTCTACAT GTGTGGACCT CCAATGATGA ACGCTGCCGT CATTGGTATG
TTGAAAAATC TTGGTGTCGA AGACGAAAAC ATCCTGTTGG ATGACTTCGG CGGCTAA
 
Protein sequence
MDILGIFKST PLEVYLGVSM FTAIVLILVL VILFAKSKLV ASGDITIGIN DDPEKAIKTG 
AGGKLLGALA NNGIFVSSAC GGGGSCGQCR VVIKSGGGDI LPTELDHISK GDARKGCRLS
CQVNVKNDME IELDEEIFGI KKWECTVISN DNKATFIKEL KLQIPDGESV PFRAGGYIQI
EAPAHHIKYA DFDVPAQYRG DWEHFGFFNL ESKVDEETIR AYSMANYPEE FGIIMLNVRI
ATPPPRNLTL PCGKMSSYIW SLKAGDKVTI SGPFGEFFAK DTDAEMVFIG GGAGMAPMRS
HIFDQLKRLK SKRKMSFWYG ARSKREMFYV EDFDGLAAEN DNFVWHVALS DPQPEDNWDG
YTGFIHNVLY ENYLKDHEAP EDCEFYMCGP PMMNAAVIGM LKNLGVEDEN ILLDDFGG