Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0945 |
Symbol | |
ID | 5081857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1054887 |
End bp | 1056143 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498070 |
Product | Na(+)-translocating NADH-quinone reductase subunit F |
Protein accession | YP_001182473 |
Protein GI | 146292049 |
COG category | [C] Energy production and conversion |
COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0537088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTC TTGGTATTTT TAAATCTACT CCACTTGAGG TTTACCTCGG TGTGAGTATG TTTACTGCTA TCGTCCTGAT CTTGGTATTA GTGATTTTAT TCGCTAAATC TAAGTTAGTG GCGAGCGGTG ACATCACGAT CGGTATTAAT GACGATCCTG AAAAAGCGAT AAAAACCGGT GCGGGCGGCA AGTTATTAGG CGCTCTTGCC AATAACGGTA TTTTCGTATC GAGTGCATGT GGTGGTGGTG GTTCTTGCGG CCAATGCCGT GTGGTGATTA AGTCTGGCGG CGGTGATATT CTGCCGACTG AACTTGACCA CATCAGCAAA GGTGATGCCC GTAAAGGTTG TCGTCTTTCT TGTCAGGTTA ACGTCAAAAA CGATATGGAA ATCGAGCTTG ACGAAGAAAT CTTCGGTATC AAAAAATGGG AATGTACTGT TATCTCTAAT GATAATAAAG CCACTTTCAT TAAAGAACTG AAGCTACAAA TTCCTGATGG CGAGTCTGTA CCATTCCGTG CGGGTGGCTA TATCCAAATC GAAGCGCCAG CTCATCACAT TAAATATGCA GATTTCGACG TACCTGCACA ATACCGTGGT GACTGGGAGC ACTTTGGTTT CTTCAATCTT GAATCTAAGG TTGATGAAGA AACGATTCGT GCATACTCAA TGGCTAACTA CCCAGAAGAG TTCGGTATTA TCATGCTGAA CGTGCGTATT GCTACGCCTC CACCACGTAA CTTGACACTG CCTTGCGGTA AGATGTCATC TTACATATGG AGCTTAAAAG CGGGTGATAA AGTGACGATT TCTGGTCCAT TTGGTGAGTT CTTCGCGAAA GATACCGATG CAGAAATGGT GTTTATCGGT GGTGGCGCGG GTATGGCACC AATGCGTTCG CACATTTTCG ACCAACTTAA GCGTCTTAAA TCTAAGCGTA AGATGAGCTT CTGGTACGGT GCGCGTTCTA AGCGTGAAAT GTTCTATGTT GAAGATTTCG ATGGTCTCGC GGCTGAGAAT GATAACTTCG TATGGCATGT GGCGCTGTCC GATCCTCAAC CTGAGGATAA CTGGGATGGT TATACTGGTT TCATCCATAA CGTACTGTAT GAAAACTACC TGAAAGACCA CGAAGCGCCT GAAGATTGTG AGTTCTACAT GTGTGGACCT CCAATGATGA ACGCTGCCGT CATTGGTATG TTGAAAAATC TTGGTGTCGA AGACGAAAAC ATCCTGTTGG ATGACTTCGG CGGCTAA
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Protein sequence | MDILGIFKST PLEVYLGVSM FTAIVLILVL VILFAKSKLV ASGDITIGIN DDPEKAIKTG AGGKLLGALA NNGIFVSSAC GGGGSCGQCR VVIKSGGGDI LPTELDHISK GDARKGCRLS CQVNVKNDME IELDEEIFGI KKWECTVISN DNKATFIKEL KLQIPDGESV PFRAGGYIQI EAPAHHIKYA DFDVPAQYRG DWEHFGFFNL ESKVDEETIR AYSMANYPEE FGIIMLNVRI ATPPPRNLTL PCGKMSSYIW SLKAGDKVTI SGPFGEFFAK DTDAEMVFIG GGAGMAPMRS HIFDQLKRLK SKRKMSFWYG ARSKREMFYV EDFDGLAAEN DNFVWHVALS DPQPEDNWDG YTGFIHNVLY ENYLKDHEAP EDCEFYMCGP PMMNAAVIGM LKNLGVEDEN ILLDDFGG
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