| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0943 |
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| Symbol | |
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| ID | 5081855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1053594 |
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| End bp | 1054226 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498068 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_001182471 |
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| Protein GI | 146292047 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00397597 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGACG CTAAAGAACT GAAACAGGTT CTGACTGGAC CTATAGTCAA CAACAACCCA
ATTGCACTCC AAATTCTTGG TGTATGTAGT GCGCTAGCAG TAACGAGTAA ACTCGAGACT
GCACTGGTAA TGGCGTTGGC ATTAACTGCG GTAACTGCGT TTTCGAACCT GTTTATCTCG
TTAATTCGTA ATCACATTCC AAGCAGTGTG CGTATTATCG TACAGATGAC CATTATTGCC
TCTTTGGTTA TCGTGGTTGA CCAATTGCTG CAAGCTTATG CTTACCAGAT CTCTAAGCAA
TTGTCGGTAT TTGTTGGTTT AATTATTACC AACTGTATCG TAATGGGCCG CGCTGAAGCC
TATGCGATGA AAACACCGCC AATGATGAGC TTTATGGATG GTATCGGCAA CGGTTTAGGT
TACGGTGTGA TTCTATTAGC CGTTGGCTTC GTACGTGAAC TGTTTGGTAA CGGTTCGCTA
TTCGGTGTCC AAATCCTGCA CAAGATCTCT GAGGGTGGCT GGTATCAACC TAACGGTATG
TTATTACTGC CTCCGAGTGC GTTCTTCCTA ATTGGTATTC TAATTTGGAT TATTCGTACC
TATAAGCCAG AGCAAGTTGA AGCAAAAGGG TAA
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| Protein sequence | MSDAKELKQV LTGPIVNNNP IALQILGVCS ALAVTSKLET ALVMALALTA VTAFSNLFIS
LIRNHIPSSV RIIVQMTIIA SLVIVVDQLL QAYAYQISKQ LSVFVGLIIT NCIVMGRAEA
YAMKTPPMMS FMDGIGNGLG YGVILLAVGF VRELFGNGSL FGVQILHKIS EGGWYQPNGM
LLLPPSAFFL IGILIWIIRT YKPEQVEAKG
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