| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0937 |
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| Symbol | |
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| ID | 5081849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1045916 |
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| End bp | 1047025 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498062 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001182465 |
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| Protein GI | 146292041 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.592464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAAGT TTGGTAGCCT GCTTTTAGCG GTATTACTTT TAGGATTAGG TGGTTGTAAG
CCACCATCCA GCAATACAGA AAAGGCAACA CCAGACATTG CACTTAGAGC CGATGCGCAG
ATTATTGAAT GGAAACTCGC GACCTCTTGG CCTAAAAACT TTCCTGGCTT AGGTATGGCT
CCCGAACGAT TTGCACGTTT AGTTGATGAG ATGTCCAATG GCCGTTTAAA AATCACTGTC
TATGGTGCGG GTGAGCTTAT GCCCGCTTTT GCTGTTTTTG ATGGCGTGAG TCAGGGCAAA
ATTCAAATGG CCCACGCGAC TTCCTTCTAC TGGAAAGGTA AATCTCCTGC GGCGCAGTTT
TTTTCATCGA TTCCCTTTGG TATGACTGCA CAAGAAATGA ATGGTTGGCT TCACTATGGT
GGCGGTATGG CACTGTGGGA AGAGGTCTAT CGACCCTTTG GGGTTATTCC GCTGGCGGGG
GGCAATACGG GGATGCAAAT GGGCGGTTGG TTTAATAAGC CCATTAATAC CATTGCCGAT
TTTAAAGGAT TGAGGGTCCG TATGCCGGGA TTGGGTGGGG AAGTCTTAAA ACGTGTTGGC
GCTGTACCTG TTAATATGGC GGGGCGTGAG ATCTATACAG CGTTGCAAAC AGGTTCAATC
GATGCGGCAG AATGGGTTGG ACCCGTCAAT GATCTTGCTT TTGGCTTGCA TAAAGTGGCT
AAGTTTTACT ATTACCCCGG CTGGCATGAA CCTGGTTCAA ATATGGAATT TTTGATTAAT
AAAGCGGCAT TTGAGAGTTT GCCCGCCGAT CTTATGGCTA TAGTCAAGGT TGCTGCCCGA
GCCATTAATC AAGATATGCT TGATGAATAT ACTTCCCGCA ATGTGTTAGC ACTTGATACA
TTGGTCAAAG ATAAAGGGGT GGTATTGAAA GAATTTCCCC CTGCGGTGTT GTCCGAGCTT
GAGAGAATTT CAAGTCAAGT TATTGGGGAC CAAGCAAATC AAGATCCTTT GATGAAGATT
GTCCATGATG CATACCGAAC CTATGAGAGA GGTGTGCGCC AATATCACAA AATATCAGAA
GATGCCTATA GTCAGCATCG TCAGCATTAG
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| Protein sequence | MHKFGSLLLA VLLLGLGGCK PPSSNTEKAT PDIALRADAQ IIEWKLATSW PKNFPGLGMA
PERFARLVDE MSNGRLKITV YGAGELMPAF AVFDGVSQGK IQMAHATSFY WKGKSPAAQF
FSSIPFGMTA QEMNGWLHYG GGMALWEEVY RPFGVIPLAG GNTGMQMGGW FNKPINTIAD
FKGLRVRMPG LGGEVLKRVG AVPVNMAGRE IYTALQTGSI DAAEWVGPVN DLAFGLHKVA
KFYYYPGWHE PGSNMEFLIN KAAFESLPAD LMAIVKVAAR AINQDMLDEY TSRNVLALDT
LVKDKGVVLK EFPPAVLSEL ERISSQVIGD QANQDPLMKI VHDAYRTYER GVRQYHKISE
DAYSQHRQH
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