| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0922 |
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| Symbol | |
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| ID | 5081834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1025836 |
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| End bp | 1026564 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640498047 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001182450 |
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| Protein GI | 146292026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCTTAG CAAAATACCT TGCCCAATGC GGCATTGGCT CTCGCCGTGA AGCCTGCCGT
TTGATTAATG CTGGGCGTAT TACACTTAAT GGCAAGATAG CCAAACATAC CAACCTAGTT
CAACGCGATG CTCAAGGTCT ATGCCTTGAT AGCATTTGCT TAGATGCAGA GCCCATAGTT
GAAACAGAAG CACTCGCTTA TTGGATATTC AATAAAGCTG TCGGCACCGA TTGCCGTTTG
CTTGAACAAG ATAAAACGAG CTTATTGCAT CTGCTTCCCA AAGCGCCAAG ACTCTACCCC
GTCGGCAGGC TAGATAAGGA CTCCCGCGGC CTGTTACTGT TAACTAACGA TGGTGAGCTG
ACCCATAAAC TGATGCACCC CAGCTTTGCC CACAGTAAAA CCTACCATGT GCGCCTCGAT
AAGCCATTCA CTGATGATTT TGTAGAACAA ATGGCAAGTG GAGTGCGTTA TAAAGATCTG
CAAACCCTGC CCTGCCAAGT ACGCCGCCTC AGTTTGGACA GCTTTGAAAT CGTGCTGACT
CAAGGATTAA ATCGACAAAT TCGGCATATG TCCAAGGCAC TCGGGTATCG CGTTATCGAT
CTTGAGCGCG TCGCTATAAT GGCGCTGAAT TTACGTGAAT TAGCATCTGG TGAGTTACCA
GAAGGGCAAA TGCGGCCATT AACACCACAG GAAACCACAG TGCTTAAAAC GGCACTGGCT
ACAGGGTAA
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| Protein sequence | MRLAKYLAQC GIGSRREACR LINAGRITLN GKIAKHTNLV QRDAQGLCLD SICLDAEPIV
ETEALAYWIF NKAVGTDCRL LEQDKTSLLH LLPKAPRLYP VGRLDKDSRG LLLLTNDGEL
THKLMHPSFA HSKTYHVRLD KPFTDDFVEQ MASGVRYKDL QTLPCQVRRL SLDSFEIVLT
QGLNRQIRHM SKALGYRVID LERVAIMALN LRELASGELP EGQMRPLTPQ ETTVLKTALA
TG
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