| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0912 |
|---|
| Symbol | |
|---|
| ID | 5081824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1012474 |
|---|
| End bp | 1014216 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640498037 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001182440 |
|---|
| Protein GI | 146292016 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTAT TTACAGTAAA ACGGCTCCTT GGAGCACTGG TACTTGTCTG TATCACTATC
AGTACCAATG CCAATGCAGA AAACGTGCTA CTCGATGAAC ATTGGAAGAT CATCAAAAAT
AAAAAGTTAG CTCGCTATTA TTTAAAGCAA TCGACTGAAG TGATTGACGG AAATTATAAG
GCCGAGATTT ATTTCAAAGA CAACGATATG CTTTTCTGCG CCAGTTCCCT CGCCGATAAC
AATATCGGTA AAACACTCAC CAGTGAACAA TTCCGCGGTG CTTATCAATG TTACTTTGAG
GATGGCAAAC CCTATGAACA AGGCTTTCGC AATGGGCAAG GCCAACTTCA TGGCTTGCTC
AAAAAATATA TAGCAACGGG CCAATTGTAT GTTGAATCCC ACTATGAAAA TGGTGTGAAA
CAAGGCCCAG AAACAGGTTA TTGGGAAGGT GGAAAGATCC GTTACAAAAC CACCTATCAA
GATGGTAAAG AGGTCGGCAT AAGCGAGCTC TTTGATAGCG AGGGAAAGCT TAGGGGCAAG
GTCTGTAATA GCGGCACTTG TGTTACCCAG TACTATGATA ATGGCAACTT GCACCTCGAA
ACCCCAATGG TGGATGGGCT CACACATGGC AACGAAACAA ACTGGGCGTT TGGTAGAATC
ATCTCGACCC AAGCTTATGT TAAAGGTAAG AAACACGGGG ATTACTTCGA ATATTTCGCT
GATGGCAAGG TAAAGCGCCA CTACCGCTAC CACAATGACT ATAAAGTCGG TGAACAGCTG
GATTACTATG AAAATGGCCA GATAGCACAA AAGGAAATCA TAGAAGCACC ATGGAATGTG
ACCTTATCGG TTAAATACGA TGAAAAGGGT GACATGCTCA GTTCAACCGA AGAAAAACAC
CAAAACAACA GCTGGGTTTA CCGTAAGCAT CAACGCTTTA GTGACGGTCA ACTTACCTCT
AACATCGAAG AAGACAAGCT TAAAAAATGG GTTCTCAACG AAATATTTGA GCAAGGTGAG
TTAATTAGCC GCAGCGAGCA TATCGATAAC CAATTGACCG GTTTATATCT GCAAACCCTA
AACCGTAGTC AAACTGTAAA AGTGATTACC CGCGAGTATT TTAAAGAGGG TAAGCGCGAA
GGCCCCTACG AAATGCTGAA AATTAAGCAT GAAACAGGGG AACAATGGCT GGCCGAGCAA
GGCCAATATG CCAACGACAA GCCCGTTGGT GCCTGGAAAA AACAACAAGA GGATGCCACC
CTCACCTTTA GCTATGATAC CCAAGGCGAA CTCCATGGCG AGTTCCGCAA TCAGACAAGT
TCTGGGCAAT TGCTTGAATT AATAAACTTT AACCATGGCA AACCCGAAGG ATTAGTCCAA
CGCTATGCCA CTGACGGCCA ATTGTATGAA AAGGGCGAAT ACCGCAATGG GCAACAGGAT
GGCGAGTGGG TGTATACCCA TGGAGAGTTC GGTTTCAACC CAAGGCCAAA TCCTGAGAGA
CGTTATTGGT ACGGACGCTT TGACCAAGGT AAACAAGTCG GCCACTGGGA ACTGCGTAAT
ACCGAAGACT ATGTGCTTGA AATAGCTAAT TATGACGAGC AGAGCAGGCT TCATGGTAAA
CAATACGAAT TTAGGGATAA TGGCTGGATA GAAGTGATCA ATAGCTTCCA TCATGGCGAG
TTTTTAAATC GGGAAATACC GCCGCCGGTG ATTACCTCGG ACCATGTCTT CCCCATTTTT
TAG
|
|---|
| Protein sequence | MRLFTVKRLL GALVLVCITI STNANAENVL LDEHWKIIKN KKLARYYLKQ STEVIDGNYK
AEIYFKDNDM LFCASSLADN NIGKTLTSEQ FRGAYQCYFE DGKPYEQGFR NGQGQLHGLL
KKYIATGQLY VESHYENGVK QGPETGYWEG GKIRYKTTYQ DGKEVGISEL FDSEGKLRGK
VCNSGTCVTQ YYDNGNLHLE TPMVDGLTHG NETNWAFGRI ISTQAYVKGK KHGDYFEYFA
DGKVKRHYRY HNDYKVGEQL DYYENGQIAQ KEIIEAPWNV TLSVKYDEKG DMLSSTEEKH
QNNSWVYRKH QRFSDGQLTS NIEEDKLKKW VLNEIFEQGE LISRSEHIDN QLTGLYLQTL
NRSQTVKVIT REYFKEGKRE GPYEMLKIKH ETGEQWLAEQ GQYANDKPVG AWKKQQEDAT
LTFSYDTQGE LHGEFRNQTS SGQLLELINF NHGKPEGLVQ RYATDGQLYE KGEYRNGQQD
GEWVYTHGEF GFNPRPNPER RYWYGRFDQG KQVGHWELRN TEDYVLEIAN YDEQSRLHGK
QYEFRDNGWI EVINSFHHGE FLNREIPPPV ITSDHVFPIF
|
|---|
| |