| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0905 |
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| Symbol | |
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| ID | 5081916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1005433 |
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| End bp | 1007226 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498030 |
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| Product | flavocytochrome c |
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| Protein accession | YP_001182433 |
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| Protein GI | 146292009 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.604755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCACAA GAAAGATTCA AAAAACAGCA CTAGCCATGC TGATCTCAGG CGCAATGGCC
GGAACGGCCT ATGCAGCGCC GGAAGTGCTA GCCGATTTTC ACGGTGAAAT GGGTGGCTGC
GATAGCTGCC ACGTATCAGA CAAAGGTGGC GTTACCAACG ACAACCTGAC CCATGAAAAT
GCCCAATGTG TTAGCTGCCA CGGTGATTTA AAAGAATTAG CCGCCGCCGC ACCTAAAGAT
AAAGTATCCC CCCATAAATC TCACTTAATT GGTGAAATTG CTTGTACTAG CTGTCATAAA
GGCCATGAAA AATCAGTAAC TTACTGTGAC GCTTGCCATA GCTTTGGCTT TGATATGCCA
TACGGTGGTA AATGGGAACG TAAGTTTGTG CCTGTTGATG CAGACAAAGC TGCTCAAGAT
AAAGCCATTG CCGCTGGCGC AAAAGAAACC ACAGATGTGG TTATTATTGG TTCAGGTGGT
GCAGGTCTAG CTGCTGCCGT ATCTGCCCGT GATGCTGGCG CAAACGTCAT TCTACTTGAA
AAAGAACCTG TACCAGGTGG TAATACTAAA CTGGCTGCGG GCGGTATGAA CGCTGCAGAA
ACGAAGCCAC AAGCTAAGTT AGGTATTGAA GATAAGAAAC AAATCATGAT CGACGACACC
ATGAAAGGTG GCCGTAATAT TAACGATCCT GAATTAGTCA AAACCTTAGC GAACAACTCA
TCAGACTCTA TCGATTGGTT AACCTCTATG GGTGCCGATA TGACAGACGT TGGCCGTATG
GGTGGTGCAA GTGTTAACCG TAGCCATCGT CCTACTGGCG GCGCAGGTGT GGGTGCCCAT
GTCGCACAAG TTCTATGGGA TAACGCCGTA AAACGCGGTA CTGATATTCG CTTAAACAGC
CGTGTAGTGC GTATTCTTGA AGATGCGAGT GGTAAAATTA CTGGCGTATT AGTGAAAGGC
GAATACACAG GTTATTACGT GATCAAAGCC GATGCAGTTG TTATTGCTGC AGGTGGTTTT
GCTAAAAACA ATGATCGCGT AGCGAAGTAC GATCCTAAGT TAAAAGGCTT TAAAGCAACT
AACCACCCAG GTGCCACAGG TGACGGCTTA GACGTAGCAT TGCAAGCTGG TGCGGCAACT
CGCGACTTAG AATTTATTCA AGCTCACCCA ACCTACTCTC CTGCAGGCGG TGTGATGATC
ACTGAAGCGG TACGTGGTAA CGGGGCTATC GTGGTTAACC GTGAAGGTAA CCGCTTTATG
AACGAAATCA CCACCCGTGA CAAAGCGTCT GCGGCGATTC TGCAACAAAA AGGCGAAAGT
GCTTATTTGG TATTTGATGA TTCAATCCGT AAGAGCTTAA AAGCCATCGA AGGCTATGTT
CACCTGAACA TTGTTAAAGA AGGCAAAACG ATTGAAGATC TGGCTAAACA GTTAGATATT
CCAGCCGCAG AACTGGCTAA AACAGTCACA GCTTACAACG GTTTCGTTAA ATCAGGTAAA
GATGCTCAAT TTGAACGTCC TGATTTACCA CGTGAATTAG TTGTAGCGCC TTTCTATGCT
CTCGAAATCG CGCCAGCGGT TCACCACACT ATGGGTGGTG TAGTGATTGA TACTAAGGCC
GAAGTGAAGA GCGAGAAAAC GGGTAAACCT ATTGATGGTT TATATGCAGC AGGTGAAGTG
ACCGGTGGTG TTCACGGCGC TAACCGCTTA GGTGGTAACG CTATCTCTGA TATCGTAACT
TACGGCCGTA TCGCGGGTGC CTCTGCAGCA AAATACGCTA AAGATAAAAA GTAA
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| Protein sequence | MFTRKIQKTA LAMLISGAMA GTAYAAPEVL ADFHGEMGGC DSCHVSDKGG VTNDNLTHEN
AQCVSCHGDL KELAAAAPKD KVSPHKSHLI GEIACTSCHK GHEKSVTYCD ACHSFGFDMP
YGGKWERKFV PVDADKAAQD KAIAAGAKET TDVVIIGSGG AGLAAAVSAR DAGANVILLE
KEPVPGGNTK LAAGGMNAAE TKPQAKLGIE DKKQIMIDDT MKGGRNINDP ELVKTLANNS
SDSIDWLTSM GADMTDVGRM GGASVNRSHR PTGGAGVGAH VAQVLWDNAV KRGTDIRLNS
RVVRILEDAS GKITGVLVKG EYTGYYVIKA DAVVIAAGGF AKNNDRVAKY DPKLKGFKAT
NHPGATGDGL DVALQAGAAT RDLEFIQAHP TYSPAGGVMI TEAVRGNGAI VVNREGNRFM
NEITTRDKAS AAILQQKGES AYLVFDDSIR KSLKAIEGYV HLNIVKEGKT IEDLAKQLDI
PAAELAKTVT AYNGFVKSGK DAQFERPDLP RELVVAPFYA LEIAPAVHHT MGGVVIDTKA
EVKSEKTGKP IDGLYAAGEV TGGVHGANRL GGNAISDIVT YGRIAGASAA KYAKDKK
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