Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0899 |
Symbol | |
ID | 5081910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1001347 |
End bp | 1001892 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498024 |
Product | hypothetical protein |
Protein accession | YP_001182427 |
Protein GI | 146292003 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATC AAATCCTGCT TGCCTTTATT TATCTTGCAG TGTTTCTCTT TTTACAGCGT GCGTTAACCC ATTGGGTGAG AAAACTCGCG CAAATGAAGC AAGTGAGTGT CGCACGGACC AGTTTGGTGA CTCGGTTTAT TTCCTATGTG ATGTTTTTTA TTACGCTGTC TTTGATGGCG GTCTCGCTGG GGCTTGGTTA TCAGGATGTA TCACTCTTTG TTTCATCGGC GTTTGCGGTG ATGGGGGTCG CCTTGGTCGC CCAGTGGTCA ATATTGAGTA ACTTAACGGC AGGCGTGCTG ATTTTTTTCG TATTTCCTTA CCGCATTGGC GAGCGTATTC GGGTGGTTGA TAAGGATGAA GATATCAGCG GGGTGATTAT CGAAATTGCG CTGTTTCACG TGCTTATTCA TCGCGACAAT GGCGATACCA TCACGTATCC CAATAACCTC ATGCTGCAAA AGGCAGTGTT AAAGCTCTCA GATCAAAGTC CGCTTGCAGA GCGTCAGGCT TTACTCGAAG GCAAAAAGAA GTTTGATCCT GAGTAA
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Protein sequence | MTNQILLAFI YLAVFLFLQR ALTHWVRKLA QMKQVSVART SLVTRFISYV MFFITLSLMA VSLGLGYQDV SLFVSSAFAV MGVALVAQWS ILSNLTAGVL IFFVFPYRIG ERIRVVDKDE DISGVIIEIA LFHVLIHRDN GDTITYPNNL MLQKAVLKLS DQSPLAERQA LLEGKKKFDP E
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