Gene Sputcn32_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0899 
Symbol 
ID5081910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1001347 
End bp1001892 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID640498024 
Producthypothetical protein 
Protein accessionYP_001182427 
Protein GI146292003 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATC AAATCCTGCT TGCCTTTATT TATCTTGCAG TGTTTCTCTT TTTACAGCGT 
GCGTTAACCC ATTGGGTGAG AAAACTCGCG CAAATGAAGC AAGTGAGTGT CGCACGGACC
AGTTTGGTGA CTCGGTTTAT TTCCTATGTG ATGTTTTTTA TTACGCTGTC TTTGATGGCG
GTCTCGCTGG GGCTTGGTTA TCAGGATGTA TCACTCTTTG TTTCATCGGC GTTTGCGGTG
ATGGGGGTCG CCTTGGTCGC CCAGTGGTCA ATATTGAGTA ACTTAACGGC AGGCGTGCTG
ATTTTTTTCG TATTTCCTTA CCGCATTGGC GAGCGTATTC GGGTGGTTGA TAAGGATGAA
GATATCAGCG GGGTGATTAT CGAAATTGCG CTGTTTCACG TGCTTATTCA TCGCGACAAT
GGCGATACCA TCACGTATCC CAATAACCTC ATGCTGCAAA AGGCAGTGTT AAAGCTCTCA
GATCAAAGTC CGCTTGCAGA GCGTCAGGCT TTACTCGAAG GCAAAAAGAA GTTTGATCCT
GAGTAA
 
Protein sequence
MTNQILLAFI YLAVFLFLQR ALTHWVRKLA QMKQVSVART SLVTRFISYV MFFITLSLMA 
VSLGLGYQDV SLFVSSAFAV MGVALVAQWS ILSNLTAGVL IFFVFPYRIG ERIRVVDKDE
DISGVIIEIA LFHVLIHRDN GDTITYPNNL MLQKAVLKLS DQSPLAERQA LLEGKKKFDP
E