| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0892 |
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| Symbol | |
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| ID | 5081903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 993587 |
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| End bp | 995341 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640498017 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001182420 |
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| Protein GI | 146291996 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.488933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCACGAT TTAATGAGAG TTTGAGTCCC TTGATCCATA AGATAGTCCG TCGCCCAACC
GTTGATGACA GTCATTTACC CGTCCATCTT CCACCTCTGT TAAAACAGCT TTATGCTCGC
CGAGGTGTCA TGCCCCATGA ATGCGAGCTT GCGCTTCAAG GGCTTTTACG CCCAGAAACG
ATGAAAGGCT TGGTTGAAGC TGCAGCCATT ATTGCTGATG CGATGCAGGC GAATAAGTCG
ATTTTAATCG TGGGTGACTT TGATGCCGAC GGTGCAACAT CAACGAGTGT GTGTATGTTA
GCGCTACGGA TGATGGGCGC TCTGAAAGTG GATTATTTGA TCCCCAATCG CTTTGATTAT
GGTTATGGAC TCAGCCCTGA AATTGTCGCG GTTGCCGCCT CGAAACAGGC TGAACTATTA
ATTACAGTTG ATAATGGTAT TTCCTCAATA GAAGGTGTTG CAGCGGCTAA AGCCTTTGGT
ATGCAAGTGA TTATTACCGA CCATCATTTG CCTGGCCATG AATTACCGGC TGCCGATGCG
ATAGTGAACC CTAACCAACC GGGCTGTCCA TTTGCCAGTA AATCGATTGC CGGTGTTGGC
GTTGCCTTTT ATTTGATGAC GGCGCTAAGG GCAGAACTTC GGACGCGAAA CTGGTATCAA
TCCCGCGGCA TCGCTGAGCC CAATTTAGGC ACACTGCTCG ATATTGTCGC CCTAGGCACT
GTTGCCGATG TGGTATCACT CGATGCCAAT AATCGAATTT TGGTCGAGGC GGGACTGCAG
CGCGTGCGAG CCGGACGTTG CCGTGTAGGG ATTACCGCGC TGCTTGAGGT GGCTAAGCGA
AATCCGGCGC GCATTGTCGC ATCTGACTTT GGTTTTGCCG TGGGGCCAAG GCTTAATGCT
GCGGGTCGTC TCGATGAAAT GGCGCTTGGG GTCGAAACGC TACTTTGTGA AGATATAATG
TACGCTCGGC GTATGGCCGC AGAGCTTGAT GGGTTAAACC AAGAGCGCCG CGAGCTGGAA
GTTGGTATGC AGCAGGAAGC CTTAAAAAGC CTAGAGCATT TAAAGCTCAA CGAAGCTGAA
TTACCTTGGG GTATCGCCTT ATTTCAAGAA GATTGGCATC AAGGCGTTAT CGGGATTTTG
GCCTCGCGCA TTAAAGACAA ATATCATAGA CCCGTGATTG CCTTTGCCGA TGCGGGCAAT
GGTGAAATTA AAGGTTCGGC GCGTTCGATA AAAGGCTTGC ATATGCGCGA CTTGCTCGAG
TTAGTGAACA CTCGCCATCC AGGATTGATT ATCAAATTTG GCGGTCATGC TATGGCGGCG
GGTTTATCGC TCAAAGCGGG CAGTTTTGCG ACATTTGCTA AAGCCTATGA TGATGCGGTG
CGTGAACAGC TTAAACCTGA GTTATTAACG GGCGAGCTTT GGTCCGATGG GGAACTCACT
CCTACAGAGT TGAATCTTGA AATTGCTCAG CTATTGCGCA ATGCGGGGCC TTGGGGACAA
GCTTTCGAAG AGCCGCTCTT TGATGGTTAT TTTAAAATAG TGCAGCAGCG CCTTGTTGGT
GAGCGCCACC TTAAGCTTGT GCTCGAAACC CAATGCGGCA CTGTGATGCT CGATGCCATT
GCCTTTAATG TGGATTTGCA CACTTGGCCC GATGCGACAA TTAATCATGC TCGAATTGTC
TATAAACTCG ATGTGAATGA GTATCGCGGC AATTTTTCGC TGCAACTGAT GGTTGAACAA
ATCGAAGCTA TGTAA
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| Protein sequence | MPRFNESLSP LIHKIVRRPT VDDSHLPVHL PPLLKQLYAR RGVMPHECEL ALQGLLRPET
MKGLVEAAAI IADAMQANKS ILIVGDFDAD GATSTSVCML ALRMMGALKV DYLIPNRFDY
GYGLSPEIVA VAASKQAELL ITVDNGISSI EGVAAAKAFG MQVIITDHHL PGHELPAADA
IVNPNQPGCP FASKSIAGVG VAFYLMTALR AELRTRNWYQ SRGIAEPNLG TLLDIVALGT
VADVVSLDAN NRILVEAGLQ RVRAGRCRVG ITALLEVAKR NPARIVASDF GFAVGPRLNA
AGRLDEMALG VETLLCEDIM YARRMAAELD GLNQERRELE VGMQQEALKS LEHLKLNEAE
LPWGIALFQE DWHQGVIGIL ASRIKDKYHR PVIAFADAGN GEIKGSARSI KGLHMRDLLE
LVNTRHPGLI IKFGGHAMAA GLSLKAGSFA TFAKAYDDAV REQLKPELLT GELWSDGELT
PTELNLEIAQ LLRNAGPWGQ AFEEPLFDGY FKIVQQRLVG ERHLKLVLET QCGTVMLDAI
AFNVDLHTWP DATINHARIV YKLDVNEYRG NFSLQLMVEQ IEAM
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