| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0890 |
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| Symbol | |
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| ID | 5081901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 991762 |
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| End bp | 992664 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498015 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_001182418 |
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| Protein GI | 146291994 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.267893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTAAGA CATATCAGAG CGATCCACTT ATTGATGCTT TTCTTGATGA CCTATGGTCG
AGCAAGGGAT TGAGTGACAA TACGTTGTCT GCCTATCGTA CGGATTTACG CCATTTTGAT
CGCCATCAAC AGCGTCATGG CACCACATTG CTTGAGGCTA CCGCGGCAGA TGTTCGATCC
TATTTAGCAT TGAGATTAGA ACAACATTTT GCGCGCACCA GTAGTGCAAG ATTGCTCAGC
AGTTTACGAC GTTTTTATAC CTATTTACTG CTGACTAAAC AGATTGCTGT TGATCCTATG
GCATTAATTG AGTCCCCTAA ATTAACGCGT CATTTACCCC ATTCGTTAAG CGAATCTCAG
GTCGATAGAT TGCTGTCTGA GCCCAATGTC GATGATCCTG TTGAATGCCG CGATAAAGCC
ATGCTCGAAC TGTTATATGC AACGGGCTTG AGGGTGAGCG AGCTTGTTGG TTTGACGATG
GAGCAGATGA GCCTACGCCA AGGTTTAGTG AGGATTGTGG GCAAAGGTGG CAAAGAGCGT
TTAGTGCCAC TGGGTGAATT GGCAGTTACA GAGGTGGAAG CCTATTTAAA ATTTGCGCGG
CAGGAATTAC TTGGTCATAA ACAATCCGAT GTGGTGTTCC CGTCTAACCG TGGGCAGATG
ATGACGCGGC AAACCTTTTG GCACCGCATT AAACTTTATG CGCTGCGGGC GGGGATTGAA
ACTGCGCTTT CACCCCACAC ATTACGCCAT GCCTTTGCGA CACATTTACT CAACCATGGT
GCCGATCTGC GAGTCGTGCA ATTGCTTTTG GGTCACAGTG ATTTATCAAC AACCCAGATT
TATACCCATG TTGCACGGGC AAGATTGCAG GAGTTGCACC AACAGCATCA TCCAAGAGGT
TGA
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| Protein sequence | MPKTYQSDPL IDAFLDDLWS SKGLSDNTLS AYRTDLRHFD RHQQRHGTTL LEATAADVRS
YLALRLEQHF ARTSSARLLS SLRRFYTYLL LTKQIAVDPM ALIESPKLTR HLPHSLSESQ
VDRLLSEPNV DDPVECRDKA MLELLYATGL RVSELVGLTM EQMSLRQGLV RIVGKGGKER
LVPLGELAVT EVEAYLKFAR QELLGHKQSD VVFPSNRGQM MTRQTFWHRI KLYALRAGIE
TALSPHTLRH AFATHLLNHG ADLRVVQLLL GHSDLSTTQI YTHVARARLQ ELHQQHHPRG
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