| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0887 |
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| Symbol | |
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| ID | 5081898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 987648 |
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| End bp | 988907 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640498012 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_001182415 |
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| Protein GI | 146291991 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTG AAGATTTCCA CCTTGACCCA AGTTTACTCG AGTCATTAAA AGCCATGGGG
CATCATTCGC CCACCACAAT TCAGCAAGAA ACTATCCCCT ATGCGCTAGA ACAAAGGGAT
ATTCTGGCAC GCGCCCCGAC TGGCACAGGC AAAACCGCAA GCTTTTTACT GCCTGCACTA
CAACATTTAA TCGATTTCCC CCGCCGATTT TCGGGCCAAG CACGCATATT AATTCTCACC
CCCACCCGTG AGTTAGCGAG CCAAATTCAT CGCTATGCTT GCCACTTAGC CACGGACCAA
GGGCTAGATA TCGCCATCAT TACTGGTGGT GTTCCCTACG CACCGCAGGA AGAAGCGCTG
GCAGGGAACG TAGATATTCT GGTTGCGACG CCTGGCCGCT TGATGGAATA CCTAGATAAA
GGCAAATTCA GCGCTGAAGA AGTTGACATA CTGATCATCG ATGAAGCCGA TCGTATGCTC
GATATGGGAT TTTCATCCGT CGTCCAAGCC ATCGCACTCG AAGCCCAAGG TCGTAAACAA
AATATGCTGT TCTCGGCGAC CTTAGAAGGC GGCGGTGTGC AGCGTTTTGC CCGCGAAGTG
TTAAAAGATC CAATCGAAAT CGATGTTGAT GCGCCCCGTA GCGAAAAGGC AAAAATCCAC
CAATGGATCC ATTTAGCCGA CGATAAAGAG CATAAGTTTG CTCTACTCTG CCATTTGCTG
CGCCAAGAAG ATGTCAAACG CACTATTGTG TTTGTAAAAA CCCGTGACAT AGTCACTAGC
TTAGAAGGCC AGTTACTCAA AGCCGGCATT CCCTGCGCCT TCATGCGTGG CGATATGGAA
CAAAAGAAAC GTTTCCAAGC ATTGAGTCGC TTTACTAAAG GTGAAGTCAA CGTATTGCTC
GCAACCGATG TTGCCGCCCG CGGTATCGAT ATCGACGACA TTACTCATGT GATCAACTTT
GATATGCCTC GCTCTGCCGA TACCTATATT CACCGAATTG GTCGAACTGG CCGCGCTGGC
GCCAAAGGTA CTGCAATTTC GCTTGCCGAA GCCCACGATA TGCGTATCGT CGGTAAAATC
GAGCGTTATA TTGAGCAACC ATTAAAACGC CGAGTGATTG AAGAGTTACG TCCAAAGAAT
AAAGAAGCGC GCACACCGGG CAAGAAAAAA GCCAAAGTGA AAGCGAAAGA AGCGGCAAAG
AAAACAAGCA AAAAGGAAGC GGCCAAGAAA GCGAGTAAAA TCGCCCGCAA AAAGAAATAA
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| Protein sequence | MQFEDFHLDP SLLESLKAMG HHSPTTIQQE TIPYALEQRD ILARAPTGTG KTASFLLPAL
QHLIDFPRRF SGQARILILT PTRELASQIH RYACHLATDQ GLDIAIITGG VPYAPQEEAL
AGNVDILVAT PGRLMEYLDK GKFSAEEVDI LIIDEADRML DMGFSSVVQA IALEAQGRKQ
NMLFSATLEG GGVQRFAREV LKDPIEIDVD APRSEKAKIH QWIHLADDKE HKFALLCHLL
RQEDVKRTIV FVKTRDIVTS LEGQLLKAGI PCAFMRGDME QKKRFQALSR FTKGEVNVLL
ATDVAARGID IDDITHVINF DMPRSADTYI HRIGRTGRAG AKGTAISLAE AHDMRIVGKI
ERYIEQPLKR RVIEELRPKN KEARTPGKKK AKVKAKEAAK KTSKKEAAKK ASKIARKKK
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