| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0886 |
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| Symbol | |
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| ID | 5081897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 986071 |
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| End bp | 987282 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498011 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001182414 |
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| Protein GI | 146291990 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA CTCTACTACG GAGACTGTCT CCTTTTTTTA TTCTGCTGCT ATTTGTTGTT
GGCGCAGCCT TGTTGATGAA AACAAAGGAG GCGCCTGAAC AAAAGCCTGA AGAAATCCCC
ATCCCTATCG TTGATGTGAT CAAAGTTGAA CAGCAAACGG TATCGTTAAA CCTGCCTTCC
TATGGCGTTG TAACACCTAA GTATAAAACC CAGTTAGTCA CTGAGGTTCA AGGCAGAATG
CTCACCATTT CGCCTCACTT TGTTGCAGGT GGCATTGTCA AGAAAGGCGA TCAATTGGCT
CAAATCGAAC CCTCTGATTA TGAAGCCGAT TTAATGCAAG CAGAAGCGAC ACTGGCACAA
GCCACTGCTG CATTGAATGA AGAAATTGCC CGTGGTGAAG TCGCTAAAAT TGAGTTCAAG
GGCTATGACA AAGGGTTACC GCCCGAGTTA GGTTTACGTA TTCCGCAACT CAAAAAAGAA
CAAGCTAATG TGAAATACGC CCAAGCGGCA TTGGCACGTG CACAACGTAA TCTTGAACGC
ACCGTTATCC GAGCTCCCTT TGATGGCATA ATCAAAGCCA GAAACGTCGA TTTAGGTCAA
TACGTTAGTC TAGGGACAAA CCTAGGTGAA CTGTACGACA CACGCATTGC CGAAATCCGC
TTACCGATTT CTAATGACGA TCTTGCCTAT TTAGAGTCCG TCGATAATCC AGATACTGAA
GTGACCTTAA GTGCCTCACT CGCAGGTAAA GAAAATACTT GGTCAGGGAA TATCATTCGT
AGTGAAGGCG TGATCGATGC AGAAAATCGT ATGGTTTACT TGGTTGCAGA GATTAAAGAT
CCTTACTTAC GTGAGCAGAA AATCGCCGGC AGTTTACCGT TAAAATACGG CAGTTTTGTC
AATGCCGTGA TTAAAGGTCG CACTGTCGAT GGCATAGTCA AATTGCCAAG GCATGTGGTT
CGCAACGACC AAGTGGTCCT GATTGATGAT AAAAATATCG TTGAAATGCG CCATGTTAAT
GTCGTCCGCA GCGATTTAGA AAATGTCTAT ATCAAAGACA GCTTAAAAAC CGGTGAACGG
GTTGCCACAA GCCACTCAAA CACTATGGCT AATGGCCAAT TGGTTAAGGT GCTAGGCGAA
GCGGCATTAC CCGTTAGCGT GCCTAAAGAT GATACGCCAG AGTCCAGCCT TGCCGCTACT
GGAGTCAAAT AA
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| Protein sequence | MMKTLLRRLS PFFILLLFVV GAALLMKTKE APEQKPEEIP IPIVDVIKVE QQTVSLNLPS
YGVVTPKYKT QLVTEVQGRM LTISPHFVAG GIVKKGDQLA QIEPSDYEAD LMQAEATLAQ
ATAALNEEIA RGEVAKIEFK GYDKGLPPEL GLRIPQLKKE QANVKYAQAA LARAQRNLER
TVIRAPFDGI IKARNVDLGQ YVSLGTNLGE LYDTRIAEIR LPISNDDLAY LESVDNPDTE
VTLSASLAGK ENTWSGNIIR SEGVIDAENR MVYLVAEIKD PYLREQKIAG SLPLKYGSFV
NAVIKGRTVD GIVKLPRHVV RNDQVVLIDD KNIVEMRHVN VVRSDLENVY IKDSLKTGER
VATSHSNTMA NGQLVKVLGE AALPVSVPKD DTPESSLAAT GVK
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