Gene Sputcn32_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0885 
Symbol 
ID5081896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp982880 
End bp986071 
Gene Length3192 bp 
Protein Length1063 aa 
Translation table11 
GC content46% 
IMG OID640498010 
Productacriflavin resistance protein 
Protein accessionYP_001182413 
Protein GI146291989 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACTC CAAAAGGGAT TATCGCTTGG TTTGCCCGAA ACAGTGTGGC AGCTAACCTT 
TTGATGTGGG CGCTACTGAT TGGCGGCCTT TTTAGTACCG TACTGATCAA TAAGGAAGTA
TTTCCTTCAT TCAACCTGAA TTTACTGAGT ATCTCTGTCG CATACCCAGG CGCTGCCCCT
CAGGAAATTG AAGAAGGCAT CAATATCAAA ATTGAAGAAG CCATCCAAGA TATCAATGGC
ATTAAGAAGG TGACTTCGGT TGCCAGTGAA GGTGTAGGAT CAATTACCAT CGAAGTTGAA
GATGGCTACG ATGTACAAAA CGTCTTAGAC GAGGCCAAAC TTAGGCTAGA TGCTATCTCC
ACCTTCCCTG TAAATATCGA AAAACCCAAT ATTTATCAGA TCAAACCCGA AAATAACGTT
ATTTGGGTAT CTGTTTATGG CGATATGACA CTGCATGATA TGAAGGAATT AGCTAAATCG
GTTCGTGACG ATTTAACTCA ATTGCCTGCC GTGACCCGCG CCAAAGTCAC TGGAGTTCGA
GATTATGAAA TCAGTATCGA AGTCTCTGAG GATAAGTTAC GTGAATATGG CCTAACCTTC
TCACAGGTCG CACTAGCAGT ACAAAATTCC TCCATCGATT TGCCCGGCGG TTCGATTCGT
GCCGAGGATG GCGATATTCT GCTGCGTACT AAAGGCCAAG CCTACACGGG GGATGACTTT
GCCAATATAG TGCTGACCAC CCGCGCCGAT GGCAGTCGAG TGATGTTGCC CCAAGTGGCA
ACAATCAAAG ACGATTTTGA AGAACGCTTG GAATACACCC GCTTTAATGG CAAACCCGCA
GCCATTATCG AAGTCATCAG TATTGATGAT CAAAACGCCT TAGATATTGC AGCCCAAGTT
AAACAATATG TCGAGAACCG ACGCGCTACA CTGCCAGCGA ATGCACAGCT CGACACTTGG
GGGGATATGA CCCATTACCT CCAAGGCCGC TTAAATATGA TGATGTCAAA CATGTTCTAC
GGCGCTTTGC TGGTTTTTCT TATCTTGGCA TTGTTCCTCG ATCTGAAACT GGCATTCTGG
GTGATGGTGG GACTACCAGT GTGCTTCCTC GGCACTATGC TCATCATGCC GCTAGAACCT
TTCTCTATGA CCATCAACAT GTTGACCCTA TTCGCTTTTA TCCTTGTACT CGGGATTGTG
GTGGATGATG CCATTGTTAT TGGAGAGAGC GCATACAGTG AAGTGGAACG CCACGGCCAC
TCAATCGATC ATGTGATCCG TGGTGCCCAA AAAGTCGCTA TGCCAGCGAC CTTTGGGGTA
TTAACTACAA TCGCAGCCTT TATTCCTATG TTGCTAGTTT CGGGTCCTAT GGGGATCATT
TGGAAATCTA TCGGCATGGT GGTAATCATG TGCCTTGCAT TCTCCTTAGT CGAATCTAAA
TTTATTCTTC CTGCGCATTT AGCACATATG AAGTTTAAAA AACCGGGTGA GCCTAGGGGA
GCATTTGGGC GTTTCAAGGC AAAATTTAAC AACGGTGTAC AACACTTTAT TCACCACCAT
TATCGTCATT TTCTCGAGTT TTGTATCAAG CACCGCTATA ACGTCGTCGC CGCCTTTATT
GGAGTATTGA TTTTATCCAT TGCCCTCGTC GCGAGCGGTA AAGTGCGTTG GGTATTCTTC
CCCGATATTC CATCTGATTT TATTCAAGTT CAGCTTGAAA TGGACGAAGG TAGCTCCGAG
CCAAACACCC TGAAAGTGGT GCAGAGCATT GAAGAAGCGC TGTATCAAAT GAATGCCAAG
ATGGAGAAAG AAAACGGCTA TCAAGTTGTC AAACATAGCT TTATCAATAT GAGTTCTCGC
ACTTCAGCAT TTATCTTTGC CGAACTCACC AAGGGTGAAG ATAGAGAAGT TGATGGTGTT
ACCATTGCGG CCGCTTGGCG TGAACAGCTC CCTGAACTGC TATCCGTTAA AAAGCTGAAT
TTTGATGCCA GTACTAATGC TGGTGGCGGT GGGGATATTT CTTTTAGATT AACCTCAACG
GATCTCGAAG AGTTATCCGC AGCATCGCGC GATCTCAAAC AAAAGCTGGC AACCTATGAA
GGTGTATATG ATATTGCAGA CAACTTCTCA TCGGGTAGCC ACGAGATTCG CTTAAAAATA
CGCCCAGAAG CCGAAGCCCT AGGATTAACA CTTTCCGATT TAGCTCGTCA GGTACGTTAT
GGTTTTTATG GCTATGAGGC ACAACGTATT TTACGTAATA AAGAAGAAAT TAAAGTCATG
GTGCGCTACC CATTAGAACA GCGTCGAACC GTCGGCTATT TGGAGAATAT GCTGATCCGT
ACTCCACAAG GCGCATCAGT CCCCTTCTCC ACTGTGGCAC AAATTGAAAA GGGAGACTCC
TATGCTTCTA TCACCCGTGT AGATGGTAAA AGAGCCATTA CTATCACGGC AAATGCCAAT
AAAAACAAAG TTGAACCTTC CAAGGTGGTA CAGGAAATTC AAAAAGATTA TCTGCCACAA
TTGCAGGCCA AGTATCCCAA AATTCAAACG GCATTAGATG GCGGCAGCTT GGATGAGCAA
AATGCCATGG TGGGGTTAAT ACAGGGCTTT TTCTTTGCCC TGTTCACCAT TTATGCTTTG
ATGGCGGTTC CGCTCAAGTC CTACAGCCAA CCACTTATCA TCATGTCGGT CATCCCCTTT
GGGATTATCG GAGCACTCTT TGGTCATTTA GTCCAAGGGC TCGCAATGAG CGTATTAAGC
CTTTGTGGCA TAGTGGCACT GGCGGGAGTG GTAGTAAACG ACTCATTGAT TTTGGTCGAC
TTTGTTAACA GAGCGCGGGA GCAAGGGCTT TCGGTCAGAC AGGCGGCAAT CGACTCTGGC
TGCTATCGCT TTAGGGCAAT TATTCTGACA TCACTCACGA CCTTCGTTGG ACTCGTGCCC
ATTATTCTCG AACGCAGTTT ACAGGCACAA ATAGTGATCC CAATGGCAAC CTCTCTCGCC
TTTGGTATCT TATTTTCGAC AGTTGTAACA CTGATCTTAG TCCCGCTGCT CTATATCATT
CTTGATGATG CTAAACGTAC CGGTAGTCGA TTTTTCCACT GGTGGTGGCG TCCTAAAAAA
GCCGAAGATA TGCATATAGA CACGGCAGGC ACTCACACGG TGGAGTTTAA GTCCCTAAAC
GAAAAGCTAT AA
 
Protein sequence
METPKGIIAW FARNSVAANL LMWALLIGGL FSTVLINKEV FPSFNLNLLS ISVAYPGAAP 
QEIEEGINIK IEEAIQDING IKKVTSVASE GVGSITIEVE DGYDVQNVLD EAKLRLDAIS
TFPVNIEKPN IYQIKPENNV IWVSVYGDMT LHDMKELAKS VRDDLTQLPA VTRAKVTGVR
DYEISIEVSE DKLREYGLTF SQVALAVQNS SIDLPGGSIR AEDGDILLRT KGQAYTGDDF
ANIVLTTRAD GSRVMLPQVA TIKDDFEERL EYTRFNGKPA AIIEVISIDD QNALDIAAQV
KQYVENRRAT LPANAQLDTW GDMTHYLQGR LNMMMSNMFY GALLVFLILA LFLDLKLAFW
VMVGLPVCFL GTMLIMPLEP FSMTINMLTL FAFILVLGIV VDDAIVIGES AYSEVERHGH
SIDHVIRGAQ KVAMPATFGV LTTIAAFIPM LLVSGPMGII WKSIGMVVIM CLAFSLVESK
FILPAHLAHM KFKKPGEPRG AFGRFKAKFN NGVQHFIHHH YRHFLEFCIK HRYNVVAAFI
GVLILSIALV ASGKVRWVFF PDIPSDFIQV QLEMDEGSSE PNTLKVVQSI EEALYQMNAK
MEKENGYQVV KHSFINMSSR TSAFIFAELT KGEDREVDGV TIAAAWREQL PELLSVKKLN
FDASTNAGGG GDISFRLTST DLEELSAASR DLKQKLATYE GVYDIADNFS SGSHEIRLKI
RPEAEALGLT LSDLARQVRY GFYGYEAQRI LRNKEEIKVM VRYPLEQRRT VGYLENMLIR
TPQGASVPFS TVAQIEKGDS YASITRVDGK RAITITANAN KNKVEPSKVV QEIQKDYLPQ
LQAKYPKIQT ALDGGSLDEQ NAMVGLIQGF FFALFTIYAL MAVPLKSYSQ PLIIMSVIPF
GIIGALFGHL VQGLAMSVLS LCGIVALAGV VVNDSLILVD FVNRAREQGL SVRQAAIDSG
CYRFRAIILT SLTTFVGLVP IILERSLQAQ IVIPMATSLA FGILFSTVVT LILVPLLYII
LDDAKRTGSR FFHWWWRPKK AEDMHIDTAG THTVEFKSLN EKL