Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0879 |
Symbol | |
ID | 5081890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 975577 |
End bp | 976398 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498004 |
Product | cytochrome c, putative |
Protein accession | YP_001182407 |
Protein GI | 146291983 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.108597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATGA ATCGACGCCA AGCATTAACC CGTATTATCG GTATTAGCAC CGCGGCAGCG GGCGCCACGC TGATGGGAAC CTCTGTTCTT GCTGCAACCA ATGCCGATGG TCAATATCAA TTAGCAATAG GTGAAAAACT CAAGTATGTA CCACTTGATC CTATGGCAAC CGCAAAATTA GCCTACGAAA CGGGTGGCGG TTGTATGCAC CAAGTGTTTC ACGCTGTTGT GACTATGCTA GCCCAATCCA ATAGTGCAGA TGCCGACAAG TTCAAGACAA TACCAACGGC TTTAGCCGCT TATGGTTTTG CGGGTGTTAC GGGACAAGGT ACGCTCTGCG GCAACCTTAA TGCGATAGGT ATGCTCGTGA ATATTTTAGA TGACATAAAT GGTCATAATA ATGCGGTGAT TGCTAACACC TTCCGCTATT ACGAAAATAC AACATTGCCT TTATCCTCAG CGGAATTTGT TGCAGGTATT GGCTCTACCG CAGAAAAAAC GGCCCTTGTC GGCAGTTCAT CAAAAGCAAA AAGCGTTTTA TGCCACTCAT CAATCAGTAA TTGGTCGAAA GCTTCTGGCT TATCATTCGC GAAGAAAGGT GAACGCTGCT ACCGCTTATC CGCCTCTATG GCCTACTACT TAGTCGATGT ATTGAACCGC GCCTATCAAG GGGAAAATAT CGCCGCCCTC AATGGCAGTA AACCAACACC CGATGCACAG GAATGCCAAC AATGCCATGG TAGTACAACC ACTTTTGGCT CAGCAGCCAG TGTGAAAACG GATATGGAAT GCACCACTTG CCATACTGGG CACTTTAATT AA
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Protein sequence | MSMNRRQALT RIIGISTAAA GATLMGTSVL AATNADGQYQ LAIGEKLKYV PLDPMATAKL AYETGGGCMH QVFHAVVTML AQSNSADADK FKTIPTALAA YGFAGVTGQG TLCGNLNAIG MLVNILDDIN GHNNAVIANT FRYYENTTLP LSSAEFVAGI GSTAEKTALV GSSSKAKSVL CHSSISNWSK ASGLSFAKKG ERCYRLSASM AYYLVDVLNR AYQGENIAAL NGSKPTPDAQ ECQQCHGSTT TFGSAASVKT DMECTTCHTG HFN
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