Gene Sputcn32_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0879 
Symbol 
ID5081890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp975577 
End bp976398 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content47% 
IMG OID640498004 
Productcytochrome c, putative 
Protein accessionYP_001182407 
Protein GI146291983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.108597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGA ATCGACGCCA AGCATTAACC CGTATTATCG GTATTAGCAC CGCGGCAGCG 
GGCGCCACGC TGATGGGAAC CTCTGTTCTT GCTGCAACCA ATGCCGATGG TCAATATCAA
TTAGCAATAG GTGAAAAACT CAAGTATGTA CCACTTGATC CTATGGCAAC CGCAAAATTA
GCCTACGAAA CGGGTGGCGG TTGTATGCAC CAAGTGTTTC ACGCTGTTGT GACTATGCTA
GCCCAATCCA ATAGTGCAGA TGCCGACAAG TTCAAGACAA TACCAACGGC TTTAGCCGCT
TATGGTTTTG CGGGTGTTAC GGGACAAGGT ACGCTCTGCG GCAACCTTAA TGCGATAGGT
ATGCTCGTGA ATATTTTAGA TGACATAAAT GGTCATAATA ATGCGGTGAT TGCTAACACC
TTCCGCTATT ACGAAAATAC AACATTGCCT TTATCCTCAG CGGAATTTGT TGCAGGTATT
GGCTCTACCG CAGAAAAAAC GGCCCTTGTC GGCAGTTCAT CAAAAGCAAA AAGCGTTTTA
TGCCACTCAT CAATCAGTAA TTGGTCGAAA GCTTCTGGCT TATCATTCGC GAAGAAAGGT
GAACGCTGCT ACCGCTTATC CGCCTCTATG GCCTACTACT TAGTCGATGT ATTGAACCGC
GCCTATCAAG GGGAAAATAT CGCCGCCCTC AATGGCAGTA AACCAACACC CGATGCACAG
GAATGCCAAC AATGCCATGG TAGTACAACC ACTTTTGGCT CAGCAGCCAG TGTGAAAACG
GATATGGAAT GCACCACTTG CCATACTGGG CACTTTAATT AA
 
Protein sequence
MSMNRRQALT RIIGISTAAA GATLMGTSVL AATNADGQYQ LAIGEKLKYV PLDPMATAKL 
AYETGGGCMH QVFHAVVTML AQSNSADADK FKTIPTALAA YGFAGVTGQG TLCGNLNAIG
MLVNILDDIN GHNNAVIANT FRYYENTTLP LSSAEFVAGI GSTAEKTALV GSSSKAKSVL
CHSSISNWSK ASGLSFAKKG ERCYRLSASM AYYLVDVLNR AYQGENIAAL NGSKPTPDAQ
ECQQCHGSTT TFGSAASVKT DMECTTCHTG HFN