Gene Sputcn32_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0873 
Symbol 
ID5081884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp968768 
End bp969784 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID640497998 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionYP_001182401 
Protein GI146291977 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.633632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGAG TCGCTATTAA TGGTTATGGC CGTATCGGCC GCTCTATCCT TCGCGCTTTA 
TATGAGTCGG GAAAACGTCA GCAAATACAG ATTGTCGCGA TTAATGAATT GGCTAAGCCT 
GAAGCCATTA TTCATCTTAC CCAATACGAT ACCACCCATG GTCGGTTTCA ACACAAAGTG 
AAGCTTGTTG ATAATCATAT GTTGATTGGC GACGATGCGA TAAAAATCCT CCACGAGCCC 
GATGCGGCAA AACTCCCTTG GCGCGAGATG GATATTGATA TCGTCTATGA GGCCACGGGC 
GTAATCTTAG ATCGTCAAAG CTGTGAAGCC CATATCCATG CTGGCGCTAA GCAAGTGCTG 
ATAAGTCATC CATCGTCAGC CGATGTTGAT GGCACTATTG TTTATGGTGT GAACCACGAT 
TTACTGCGCG CCGGACATAC CGTTGTCTCA AATGCCTCAT GCACTACCAA CTGTATCGTG 
CCAGTGATTG ATGTACTCGA TAAACACTTT GGGGTGAAAA GCGGTGCTAT TACCACCATC 
CATTCGGCGA TGAACGATCA GCAAGTGATT GATGCCTATC ATGATGATTT ACGTCGCACC 
CGAGCTGCAG GCCAATCTAT TATCCCCGTT GACACTAAAC TTGCCCGCGG TATTGAGCGG 
ATTTTGCCAC ATATGAAGGA CAAGTTTGAG GCCATTTCGG TGCGCGTGCC AACGATTAAC 
GTAACCGCGA TCGACTTGTC TGTCACCTTA GCGAAAACCG TTGATATTGC CAGCGTGAAC 
CAAGTGTTAG AATTGGCCGC CAATGGGCGA TTTAACGGTA TCCTAGGCTA TACTGATGAG 
CCTTTGGTAT CATGTGATTT CAACCATGAT CCCCGCTCCA GTATTGTTGA TGGCACTCAA 
ACTCGGGTAA GCGCTGGGCA GTTAGTTAAA CTGTTGCTGT GGTGCGATAA CGAGTGGGGT 
TTTGCTAATC GTATGTTGGA TACGAGTTTG GCGATGATTG CAGCTAAACA AAGCTGA
 
Protein sequence
MIRVAINGYG RIGRSILRAL YESGKRQQIQ IVAINELAKP EAIIHLTQYD TTHGRFQHKV 
KLVDNHMLIG DDAIKILHEP DAAKLPWREM DIDIVYEATG VILDRQSCEA HIHAGAKQVL 
ISHPSSADVD GTIVYGVNHD LLRAGHTVVS NASCTTNCIV PVIDVLDKHF GVKSGAITTI 
HSAMNDQQVI DAYHDDLRRT RAAGQSIIPV DTKLARGIER ILPHMKDKFE AISVRVPTIN 
VTAIDLSVTL AKTVDIASVN QVLELAANGR FNGILGYTDE PLVSCDFNHD PRSSIVDGTQ 
TRVSAGQLVK LLLWCDNEWG FANRMLDTSL AMIAAKQS