Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0863 |
Symbol | |
ID | 5081874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 957829 |
End bp | 959160 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640497988 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001182391 |
Protein GI | 146291967 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAC AAAGGTCGTC AGCGTTAGGC CGTGCTTGGT CACGTTGGAT GTCAGTGCCA CTATGGCTGC AAATTTTTAT TGGTATGGTG CTAGGTATCA CTGTTGGGGT GGTGTTAGGT GAACAGGCGG TTTTCTTAAA GCCTATCGGT ACGTTGTTTG TGAATACAAT CAAGATGTTG ATTGTACCTT TAGTGTTCTG CTCTTTAATT GTCGGCGTGA CGTCGATGGA AGACACCGCC AAAATGGGAC GTATCGGCTT TAAATCCTTT GCGTTTTATC TCTGTACTAC CGCTATTGCC ATTAGTTTGG GGCTTTTGGT GGGTTATGTT ATCCAACCCG GCGCAGGTGT ACCGCCTTTG CAGCATGATG TTGTGCATAC CGCAAAGGAA GTCCCTTCGG TTATGCAGAC CTTGATCGAT ATTGTACCGA CCAATCCTAT TGCCGCATTA GCAAGTGGAC AAATCTTACA AGTGATTGTA TTTGCTGTCG CCCTAGGGAT TGCACTGGTG CTGATTGGTG ATCATGGTAA ACCGGCGATT AAAGTGTTTG AGAGCTTAGC CGAGGCGATG TACAAGCTCA CTGATATGGT GATGAAACTT GCGCCATATG GGGTGTTTGG CTTAATGGCT TGGGTGGCCG GTGAGTATGG TATCGACATG CTGTGGCCAC TTATTAAAGT GATTATTGCG GTTTACCTCG GCTGTATTAT TCATGTATTA GGCTTTTACA GCATAGTATT GCGCGTGTTC GCTAAATTAA ATCCATTGCA TTTCTTCAAG GGCATTAGCA ATGCCATGGC AGTGGCTTTT ACAACATCAA GCTCTGCTGG CACCTTACCT GCGAGCATGA AATGTGCCAG TGAGTATTTA GGGGTTAATA AAAAGATTTC GAGCTTTGTA TTACCGCTTG GCACCACGAT AAATATGGAT GGCACAGCGT TATACCAAGG TGTGACAGCA TTATTTGTGG CACAGGCCTT TGGTATCGAT TTAACTTGGG TAGATTATCT CACCATTATT TTAACGGCGA CGTTGGCTTC TATTGGTACT GCTGGTGTAC CTGGGGCTGG ATTAGTGATG TTGACCTTAG TGCTATCAAC AGTGGGTCTT CCACTGGAAG GGGTAGCGTT AATCGCAGGG ATTGACCGTA TTTTGGATAT GGCTCGTACC GTTGTAAACG TCTCGGGCGA CTTAGTGGCA ACGACTATTA TCGCTAAATC AGAAGATGAG CTTGATGAAG CGCATTACAA TGCTGATATG GTGCAAAGTG CAGTCTTAGC AGAACAAAAT GCCGCCATTG AAAACGCCGC TGCGAAGAAT GCTAAAGCGT AA
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Protein sequence | MSKQRSSALG RAWSRWMSVP LWLQIFIGMV LGITVGVVLG EQAVFLKPIG TLFVNTIKML IVPLVFCSLI VGVTSMEDTA KMGRIGFKSF AFYLCTTAIA ISLGLLVGYV IQPGAGVPPL QHDVVHTAKE VPSVMQTLID IVPTNPIAAL ASGQILQVIV FAVALGIALV LIGDHGKPAI KVFESLAEAM YKLTDMVMKL APYGVFGLMA WVAGEYGIDM LWPLIKVIIA VYLGCIIHVL GFYSIVLRVF AKLNPLHFFK GISNAMAVAF TTSSSAGTLP ASMKCASEYL GVNKKISSFV LPLGTTINMD GTALYQGVTA LFVAQAFGID LTWVDYLTII LTATLASIGT AGVPGAGLVM LTLVLSTVGL PLEGVALIAG IDRILDMART VVNVSGDLVA TTIIAKSEDE LDEAHYNADM VQSAVLAEQN AAIENAAAKN AKA
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