Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0861 |
Symbol | |
ID | 5081872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 955657 |
End bp | 956952 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640497986 |
Product | aromatic amino acid permease |
Protein accession | YP_001182389 |
Protein GI | 146291965 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAG ATGCGACGAG TGTTCTTGGT ACACCCCAAA ACACGCAGGA ACACGATTCA ACAAGACGTT TATCTTGGAC GCGCCAAGAC ACCACTTGGA TGCTGAGTTT ATTTGGTACC GCAGTCGGTG CTGGAATTTT GTTTTTACCT ATTAATGCGG GTATGGGCGG TTTTTGGCCA TTAGTGCTTA TGGCTGCCAT TATCGGCCCT ATGACCTACT TAGCTCACCG TGGACTCTCT CGTTTTGTAT GTTCATCGAG CATTCCTGGC AGTGATGTGA CTCAAGTGGT TGAGGAGCAT TTTGGTGTGG GTGCAGGTAA AGCGATTACC GTGCTGTATT TCTTCGCAAT TTATCCCATT GTTTTAATTT ATGGAGTGGG GATCACTAAC ACAGTTGATA GCTTTATTGT GAACCAACTT GGTATGGCTT CACCACCGCG TTTCTTACTT TCCGGAGTTT TGATCTTCGG TATGATGGCG GTTATGGTGG CGGGTGAGAA GTTTATGCTC AAGGTCACTC AGTTACTGGT TTATCCATTG GTGGGGATTT TGGCATTTAT GTCGATTTAT TTAATTCCTG AATGGAAAAT GGATGCACTG CAGGTTGTGC CTGAAGCGGG AGCCTTTTTA GGCACGGTTT GGTTAACGAT CCCTGTGTTG GTATTTGCCT TTAACCATTC ACCTGCTATT TCACAGTTTT CGGTATCCCT TAAACGTGAC CATGGTGTTA ATGCCGCACG TAAAGCCGAT GTGATTTTAC GCAATACGTC CATGATGTTA GTCGGTTTTG TGATGTTATT TGTGTTCTCC TGTGTGTTGT CTCTATCACC GGAGCAACTC GCCGATGCAA AAGCGCAAAA CCTGCCGATT CTGTCTTACC TTGCAAACGT ACATAACAGT GGTTTTGTAA GCTACTTTGG TCCATTTATC GCCTTTATTG CGATTGTATC GTCCTTCTTT GGGCACTATA TGGGTGCAAC AGAAGGTATG AAAGGGATCA TCGTTAAACA GTTACGTTCG AGCAATAAAA GTATTTCAGA GCAAAAGATC AACACCTTTA TTTTGGTGTT TATGTTTGTG ACGATTTGGG GCGTTGCAAT CAAAAACCCC AGTATTTTGG ATATGATTGA AGCCTTGGGT GGGCCTATCA TTGCGGCGAT TTTGTATTTA ATGCCTATGT ATGCCGTGTA TAAAGTGCCC GCACTTAAGG CTTACCGTGG CCGTATCAGC AATATCTTTG TGGTGATTGC TGGTGTACTG GCGATGACAG CGATTTTGTT TGGTTTCTTC CGCTAA
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Protein sequence | MQKDATSVLG TPQNTQEHDS TRRLSWTRQD TTWMLSLFGT AVGAGILFLP INAGMGGFWP LVLMAAIIGP MTYLAHRGLS RFVCSSSIPG SDVTQVVEEH FGVGAGKAIT VLYFFAIYPI VLIYGVGITN TVDSFIVNQL GMASPPRFLL SGVLIFGMMA VMVAGEKFML KVTQLLVYPL VGILAFMSIY LIPEWKMDAL QVVPEAGAFL GTVWLTIPVL VFAFNHSPAI SQFSVSLKRD HGVNAARKAD VILRNTSMML VGFVMLFVFS CVLSLSPEQL ADAKAQNLPI LSYLANVHNS GFVSYFGPFI AFIAIVSSFF GHYMGATEGM KGIIVKQLRS SNKSISEQKI NTFILVFMFV TIWGVAIKNP SILDMIEALG GPIIAAILYL MPMYAVYKVP ALKAYRGRIS NIFVVIAGVL AMTAILFGFF R
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