Gene Sputcn32_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0861 
Symbol 
ID5081872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp955657 
End bp956952 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content44% 
IMG OID640497986 
Productaromatic amino acid permease 
Protein accessionYP_001182389 
Protein GI146291965 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG ATGCGACGAG TGTTCTTGGT ACACCCCAAA ACACGCAGGA ACACGATTCA 
ACAAGACGTT TATCTTGGAC GCGCCAAGAC ACCACTTGGA TGCTGAGTTT ATTTGGTACC
GCAGTCGGTG CTGGAATTTT GTTTTTACCT ATTAATGCGG GTATGGGCGG TTTTTGGCCA
TTAGTGCTTA TGGCTGCCAT TATCGGCCCT ATGACCTACT TAGCTCACCG TGGACTCTCT
CGTTTTGTAT GTTCATCGAG CATTCCTGGC AGTGATGTGA CTCAAGTGGT TGAGGAGCAT
TTTGGTGTGG GTGCAGGTAA AGCGATTACC GTGCTGTATT TCTTCGCAAT TTATCCCATT
GTTTTAATTT ATGGAGTGGG GATCACTAAC ACAGTTGATA GCTTTATTGT GAACCAACTT
GGTATGGCTT CACCACCGCG TTTCTTACTT TCCGGAGTTT TGATCTTCGG TATGATGGCG
GTTATGGTGG CGGGTGAGAA GTTTATGCTC AAGGTCACTC AGTTACTGGT TTATCCATTG
GTGGGGATTT TGGCATTTAT GTCGATTTAT TTAATTCCTG AATGGAAAAT GGATGCACTG
CAGGTTGTGC CTGAAGCGGG AGCCTTTTTA GGCACGGTTT GGTTAACGAT CCCTGTGTTG
GTATTTGCCT TTAACCATTC ACCTGCTATT TCACAGTTTT CGGTATCCCT TAAACGTGAC
CATGGTGTTA ATGCCGCACG TAAAGCCGAT GTGATTTTAC GCAATACGTC CATGATGTTA
GTCGGTTTTG TGATGTTATT TGTGTTCTCC TGTGTGTTGT CTCTATCACC GGAGCAACTC
GCCGATGCAA AAGCGCAAAA CCTGCCGATT CTGTCTTACC TTGCAAACGT ACATAACAGT
GGTTTTGTAA GCTACTTTGG TCCATTTATC GCCTTTATTG CGATTGTATC GTCCTTCTTT
GGGCACTATA TGGGTGCAAC AGAAGGTATG AAAGGGATCA TCGTTAAACA GTTACGTTCG
AGCAATAAAA GTATTTCAGA GCAAAAGATC AACACCTTTA TTTTGGTGTT TATGTTTGTG
ACGATTTGGG GCGTTGCAAT CAAAAACCCC AGTATTTTGG ATATGATTGA AGCCTTGGGT
GGGCCTATCA TTGCGGCGAT TTTGTATTTA ATGCCTATGT ATGCCGTGTA TAAAGTGCCC
GCACTTAAGG CTTACCGTGG CCGTATCAGC AATATCTTTG TGGTGATTGC TGGTGTACTG
GCGATGACAG CGATTTTGTT TGGTTTCTTC CGCTAA
 
Protein sequence
MQKDATSVLG TPQNTQEHDS TRRLSWTRQD TTWMLSLFGT AVGAGILFLP INAGMGGFWP 
LVLMAAIIGP MTYLAHRGLS RFVCSSSIPG SDVTQVVEEH FGVGAGKAIT VLYFFAIYPI
VLIYGVGITN TVDSFIVNQL GMASPPRFLL SGVLIFGMMA VMVAGEKFML KVTQLLVYPL
VGILAFMSIY LIPEWKMDAL QVVPEAGAFL GTVWLTIPVL VFAFNHSPAI SQFSVSLKRD
HGVNAARKAD VILRNTSMML VGFVMLFVFS CVLSLSPEQL ADAKAQNLPI LSYLANVHNS
GFVSYFGPFI AFIAIVSSFF GHYMGATEGM KGIIVKQLRS SNKSISEQKI NTFILVFMFV
TIWGVAIKNP SILDMIEALG GPIIAAILYL MPMYAVYKVP ALKAYRGRIS NIFVVIAGVL
AMTAILFGFF R