Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0842 |
Symbol | |
ID | 5081953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 935404 |
End bp | 936249 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640497967 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_001182370 |
Protein GI | 146291946 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00913257 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATAC GTATTCTTTG GTTTCTTGTG TTAACGCTGA GCATTCTTTC AGGAGCGGCT GCAGCATCGG ATATTGCCAG CAGTGTTAAC GGAGGTACTA ATCGTCTTGC TGACGGCGGT GATTTTGAAC TGGGCATGAG TGTTTACGGG ATAAATCGAG TCGATGTTCG GCAAACGGAT GATGGTGCTG CACAGTTGTC TTTGTTGATA AGTGGTATGT ACCAGTACAA AGGGCTATTT GTTGAGATGA TCCACCAATC TCAAGATGGC ATTAATCTAG GGTTTAATCT TTGGAGCTCA GAGGATTGGT CTTTAGAGTT GCTGCTGGCT AATTTACAAA GTTCATGGTC TCGTCCTGAT GTTGATCCCC GAACACTCGA TGAAGCTGGC CGCAATGCTT ATTTACTCTC GGAAGATTCT CTTTATATTG GCGCAGGTTT TCGTGCCACG CGTTATTGGG GCGATAACTA CGTTTTCCAG TATAGATTAG TGTCTGATTA CTACGATGAC CAAGGGATTC AGAGTTCAGC TAGATTAGGC AAGTCTTGGC AAGTGCGTAA TTGGAATTTT CACGTATTGG GGAGCGTCGG CTACTCATCC GCCACCTTAA ATCGTTATCT TTTTGGGATC AGTAAGGAAG AAGCGACCGA ACGCTTTCCT GAATATCAAC CAAACAGTTC TTTTAGTTAC GGTATGGAGG TGGGGGTTGC CTATCCTTTA AGTGAGAGTG TTGTCTTTCG AGCTATGTAT CGCTTGAATC TGTTGTCCAA AGAAGTTACA GACAGTCCCC TAAATCAAGC CAGCTATGTC TCCTATTTTA ATGCCTCTAT TAGCTATGTG TTTTAG
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Protein sequence | MGIRILWFLV LTLSILSGAA AASDIASSVN GGTNRLADGG DFELGMSVYG INRVDVRQTD DGAAQLSLLI SGMYQYKGLF VEMIHQSQDG INLGFNLWSS EDWSLELLLA NLQSSWSRPD VDPRTLDEAG RNAYLLSEDS LYIGAGFRAT RYWGDNYVFQ YRLVSDYYDD QGIQSSARLG KSWQVRNWNF HVLGSVGYSS ATLNRYLFGI SKEEATERFP EYQPNSSFSY GMEVGVAYPL SESVVFRAMY RLNLLSKEVT DSPLNQASYV SYFNASISYV F
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