Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0840 |
Symbol | |
ID | 5081951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 933609 |
End bp | 934922 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497966 |
Product | SufS subfamily cysteine desulfurase |
Protein accession | YP_001182369 |
Protein GI | 146291945 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.550163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAT CAGCATCGCT TACACCAAAC TCTGTGACTC ATCATCCGAC GTCCCATGCC ACGCGTGGAG CGACTGTCAT ACAGTGTTCA TTAGAGGCGA CACAGCGCAA TGCTCAGATT AGATCGCAAT TCCCAGTCTT AAATCAAATG CTTGATGGCT ATCCCCTATG TTATCTCGAC ACCGCAGCCA CCAGCCAAAA GCCACAAATG GTACTCGATG CCATGGCACA GTTTTACACC AACGACAATG CCAATGTGCA CCGTGCAGCG CATCAGTTAT CGGCGCGTTC GACCTTAAGC TATGAAAAAG TGCGCGATCA ATTGCAACAG TTTTTAAAGG CAAAACACCG CGAAGAAATC ATTTTTACCC ACGGCACCAC AGAATCCATC AACTTAGTCG CCTTTGGACT CACAGCGCAT TTAAGCAAAG GGGATGTGAT ACTTATCGAC ACTGCAGCCC ACCACGCTAA TATTGTGCCT TGGCAGGAAC TAGCAAAACG CACGGGGGCT GTCATTAAAC CTATCCCTCT GATGCAAGAT TGCCGTTTAG ATATCAACGC CTATCAAACC TTGCTTAAAT TAAAACCTAA AATTGTTGCA CTTTGCCATG TTTCCAATGC ATTAGGCACA GTTAATCCCG TGGCTCAGTT AGTTAAATTA GCGAAAGCAC AAGGGGCGAT CACCTTAGTT GACGGCGCTC AAGCCGTGGC ACATTTAACG CTGGATATGG CTGAAATCGA CTGCGATTTT TATGTATTCT CAGGACATAA AATGTATGGT CCCACTGGCG TTGGCGTGCT TTATGGTCGT TTAGACGTAT TAGACACGCT CACACCACTG TTAACTGGCG GTGAGATGAT TAAGCGCGTG AGCTTTGAAG CGACAGAATT TGGCAGCCTG CCAAATCGCT TAGAAGCCGG CACGCCGCCC ATTGCCGAGG TGATAGGCTT AGGCGCAGCC ATTACCTTTT TACAAACTGA GCTTACACCG CAGGTTCAAG CCTATGAAGC TGAACTACTT AGGTATTTAC AAACCCAATT GTGCGCCCTA GGTCAAGTGC ATTTATACGG AGCCTTTGAC AACAACATTG GCGTGGTTGC CTTTAACCTC GCCGATGAAC ATCATCAAGA TGTAGGCATT TTACTGGATC AACAAGGGAT TGCCGTGCGC TGTGGCCATC ACTGTGCCAT GCCATTAATG CACACTCTCA ATCTTAAGGG CTGTTGCCGC GCTTCTATCG GTATTTATAC GAATAAAGAC GATATTGACC GCTTTATTGC CGCATTAGCC TCGGTCAAAG ACTTGCTGTT GTAA
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Protein sequence | MTQSASLTPN SVTHHPTSHA TRGATVIQCS LEATQRNAQI RSQFPVLNQM LDGYPLCYLD TAATSQKPQM VLDAMAQFYT NDNANVHRAA HQLSARSTLS YEKVRDQLQQ FLKAKHREEI IFTHGTTESI NLVAFGLTAH LSKGDVILID TAAHHANIVP WQELAKRTGA VIKPIPLMQD CRLDINAYQT LLKLKPKIVA LCHVSNALGT VNPVAQLVKL AKAQGAITLV DGAQAVAHLT LDMAEIDCDF YVFSGHKMYG PTGVGVLYGR LDVLDTLTPL LTGGEMIKRV SFEATEFGSL PNRLEAGTPP IAEVIGLGAA ITFLQTELTP QVQAYEAELL RYLQTQLCAL GQVHLYGAFD NNIGVVAFNL ADEHHQDVGI LLDQQGIAVR CGHHCAMPLM HTLNLKGCCR ASIGIYTNKD DIDRFIAALA SVKDLLL
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