Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0835 |
Symbol | |
ID | 5081946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 927099 |
End bp | 929015 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640497961 |
Product | peptidase U32 |
Protein accession | YP_001182364 |
Protein GI | 146291940 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGC CAGAGATTTA CACCCCTGAG AATCTTTCTC ACGTTCATAA CCGCCTCGAG TTATTGGCGC CAGCAAAAAA TGCTGACTAC GGTATCGAAG CCATACGCCA TGGTGCCGAC GCGGTTTATA TCGGTGGCCC AGCATTTGGT GCTAGAGCAA CGGCGGGTAA CAGTGTTGAA GATATCGCGC GTCTGTGTAC CTATGCTCAC AAGTACCATG CTCAAGTGTT TGTCGCGCTT AATACTATCC TGATGGATAA CGAACTGGCT GATGCTGAAA AACTCATTTG GCAATTGTAT GAAGCCGGTG CCGATGCGCT GATTGTGCAG GACATGGGCG TATTGCAACT TAATTTACCA CCGATTGCCT TGCATGCCAG TACTCAAATG GATAACCGCA GCCCTGAAAA GGTGGCGTTT TTAGAGCAAG TGGGATTTTC ACAGGTTGTA CTTGCCCGCG AACTTGGCCT AAGCCAGATC CGTGAAGTGG CGGCGCATAC TAATATGCAG CTTGAATTTT TTATTCACGG TGCGCTTTGC GTGGCCTACA GTGGGCTATG CAACTTAAGC CATGCTTTTA GTAATCGCAG TGCTAACCGC GGAGAATGTT CGCAAATGTG CCGTTTGCCG GGGAATTTAA AAACTCGTGC AGGAGATGTA TTAGCGCAGA ATGAGCATTT ATTGTCACTT AAAGACAATA ACCAAACCGA AAACCTTGAA GCGCTAATTG ATGCTGGTAT TCGTTCATTT AAGATCGAAG GTCGCCTTAA GGATTTAAGT TACGTTAAAA ACGTCACTGC CCACTATCGG CAAAAACTTG ATGCGATTAT GGCGCGTCGC CCTGAATTTG TGGCTTCATC CCATGGTCGT TGCGAGCACA CTTTTACCCC AGATCCTGAA AAAACCTTTA ACCGCGGCAG TACGGACTAT TTTGTCCATG AACGTAGCCA AGGGATCAAA GATTTTCGCT CACCAAAATA CATAGGCGAA GATGTGGGTA GAGTGGTCAG CATAGGCAAA GACTTTATCC AAGTGAGTTC GACCCATGAG TTCAACAATG GTGATGGCTT AGCATTTTTC CCCCTCAATT ATGCCATGGC CAAACAGTCC GATGATAAAC TCCAAGGCTT ACGGGTCAAT CGAGCAGAAG GGCTTAAGTT GCATATATTA CAGGTGCCAA AGGACTTAAA GGTTGGGATG ACGTTATACC GCAACCATAA TCAAGCCTTC GAAACCTTAC TCGCCAAGGA ATCATCTAAA CGTATTATTG GCGTGGATAT GCGCTTGAGC GATACCACTG ATGGACTTGC GTTGACCCTA ACTGATACTT ATGGGTTAAG CGCCTGCGTG AACTTAGTGG CCGAAAAAAC ACCTGCGACC GATATTGAAA AAACGCTGCA AACAACCCGC ACTCAGCTTG GTAAACTCGG TAGTACTGAC TTTGTTGCCC GCAGTATCAG TATCGATACG GCCCAAGCGT GGTTCTTACC AGCGTCAGTG CTTAATGGTT TGCGCCGTGA TGCGGTTGCA GCGTTAGAAG TGGCTCGCGT GCAGGGATAT ATACGTCCAA AACCATGGAA ATATAACCAA GATGCAGTTT ATCCTGTTAA GCATTTGAGT TACTTAGGTA ATGTCGCAAA TCAAAAGGCG AAAGATTTTT ATCAACGCCA TGGTGTGATT GAAATTCAAG ACACCTATGA GAAAAACGGT GTCACCGAAG ATGTGCCCTT AATGATCACT AAGCATTGTT TGCGCTTTAA CTTTAATCTT TGCCCTAAAG AAGTGCCGGG GATCAAAGCC GATCCTATGG TGCTCGAAAT TGGTAACGAT GTGCTTAAAT TGGTGTTCGA CTGCCCTAAA TGCGAAATGA TGGTGGTCGG TGAAAATCGT CAAGTACGAG GGCTGAAGCA GATTTAA
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Protein sequence | MSQPEIYTPE NLSHVHNRLE LLAPAKNADY GIEAIRHGAD AVYIGGPAFG ARATAGNSVE DIARLCTYAH KYHAQVFVAL NTILMDNELA DAEKLIWQLY EAGADALIVQ DMGVLQLNLP PIALHASTQM DNRSPEKVAF LEQVGFSQVV LARELGLSQI REVAAHTNMQ LEFFIHGALC VAYSGLCNLS HAFSNRSANR GECSQMCRLP GNLKTRAGDV LAQNEHLLSL KDNNQTENLE ALIDAGIRSF KIEGRLKDLS YVKNVTAHYR QKLDAIMARR PEFVASSHGR CEHTFTPDPE KTFNRGSTDY FVHERSQGIK DFRSPKYIGE DVGRVVSIGK DFIQVSSTHE FNNGDGLAFF PLNYAMAKQS DDKLQGLRVN RAEGLKLHIL QVPKDLKVGM TLYRNHNQAF ETLLAKESSK RIIGVDMRLS DTTDGLALTL TDTYGLSACV NLVAEKTPAT DIEKTLQTTR TQLGKLGSTD FVARSISIDT AQAWFLPASV LNGLRRDAVA ALEVARVQGY IRPKPWKYNQ DAVYPVKHLS YLGNVANQKA KDFYQRHGVI EIQDTYEKNG VTEDVPLMIT KHCLRFNFNL CPKEVPGIKA DPMVLEIGND VLKLVFDCPK CEMMVVGENR QVRGLKQI
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