| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0834 |
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| Symbol | |
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| ID | 5081945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 926216 |
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| End bp | 926896 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497960 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001182363 |
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| Protein GI | 146291939 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTG ATTTTATTTA TCAACCACCC ACAACACCTT GGCTTGAGAT TCTTTATCAA
GATAAAGATA TTATCGTGAT TAACAAACCT TCAGGATTGT TGTCTGTGCC AGGTCGAGAT
CCAGCCCATT ACGATAGTGT TTATGCCCGC GTAAAAGCCG AACACCCCCA TTGCCAAATC
GTGCATCGTC TCGATATGGC AACCTCGGGC GTGATAGTCC TCGCCCTTAT TCGTAGTGCT
GAACGAGAAC TAAAACGTCA ATTCCACGAT AGAGAAACCA GTAAAACGTA TATTGCACGG
GTTGCAGGCC ATATAAAGCA CGACACAGGT AGTATTGACT ACCCACTTAT CTGCGATTGG
CCAAATAGAC CCAAACAAAA AGTCGATCAT TTTGTCGGTA AACCTTCGCT CACTCACTAT
CAAGTTATGA GTCGAGCCAA ACGTTCAACA CTCGTTAAAC TCACCCCAAT CACGGGCCGC
TCACATCAAT TACGGGTGCA TATGATGGCA ATAGGCCATC CTATTTTAGG AGACGGTTTT
TATGCCGATC CACTCGCTAA ATCATTAGCC CCCCGCCTAT TACTCCATGC GGCAGAGCTC
ACCATCAAAC ATCCCTACAC AGGTGTTAGC ATGACTTTTA GCACTGAAGC CCCGTTTTGT
GAGCCTTTGG GTGAACAATG A
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| Protein sequence | MMTDFIYQPP TTPWLEILYQ DKDIIVINKP SGLLSVPGRD PAHYDSVYAR VKAEHPHCQI
VHRLDMATSG VIVLALIRSA ERELKRQFHD RETSKTYIAR VAGHIKHDTG SIDYPLICDW
PNRPKQKVDH FVGKPSLTHY QVMSRAKRST LVKLTPITGR SHQLRVHMMA IGHPILGDGF
YADPLAKSLA PRLLLHAAEL TIKHPYTGVS MTFSTEAPFC EPLGEQ
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