Gene Sputcn32_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0828 
Symbol 
ID5081939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp918472 
End bp919131 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content50% 
IMG OID640497954 
Productaromatic acid decarboxylase 
Protein accessionYP_001182357 
Protein GI146291933 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTACC CAAAGTCGAC TAAGGCAATT AGCTTAGCTT GGACTGGCGC CTCGGGCGCT 
CCCTATGGAC TGAAGTTACT CGAATGTCTG TTGGCTTCTG GTTTTCAAGT GTTTTTGATG
ATTTCGAGTG CGGCGCGAGT GGTGTTAGCG ACAGAGCACG GTTTGCAACT CAGTGCGAAT
AGCGAAAAAG CGAAACAACA ACTGCTTGCT GTATTGGCAG AAAAAAATGC GGCTATTGTG
GGGGAATTGG TTGTGCTTGG TAAGGATGAG TGGTTTTCTC CCCCCGCATC AGGCAGCGCC
GCACCTAAAC AAATGGTCAT TTGTCCTTGC TCGACAGGAA CACTCGCGGC GGTTGCGACA
GGAATGAGCA ATAATCTGCT TGAACGAGCC GCAGATGTGG TGATTAAAGA ACGCGGACAG
CTTATCCTAG TGCCCAGAGA AACCCCTTTT AGTGCTATAC ATCTCGAACA TATGTTGAGC
CTTTCTCGCC TCGGTGTGAC GATTATGCCT GCGGCGCCCG GTTTTTATCA CAATCCCAAA
TCGGTGGAAG ATCTGGTAGA CTTCATGGTC GCTCGAATTC TCGATCATTT GGGCGTTGAC
CATGCACTAA CGAGTCGCTG GGGGTATGAC AAGCAGACCC ACCGTGACCT CGACAATTGA
 
Protein sequence
MVYPKSTKAI SLAWTGASGA PYGLKLLECL LASGFQVFLM ISSAARVVLA TEHGLQLSAN 
SEKAKQQLLA VLAEKNAAIV GELVVLGKDE WFSPPASGSA APKQMVICPC STGTLAAVAT
GMSNNLLERA ADVVIKERGQ LILVPRETPF SAIHLEHMLS LSRLGVTIMP AAPGFYHNPK
SVEDLVDFMV ARILDHLGVD HALTSRWGYD KQTHRDLDN