Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0822 |
Symbol | |
ID | 5081933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 912312 |
End bp | 912878 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640497948 |
Product | hypothetical protein |
Protein accession | YP_001182351 |
Protein GI | 146291927 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3056] Uncharacterized lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGGC TATTACTGAC TTTGACTTTT CCCCTGCTAT TCGTGGGCTG CGCTAGCCAA AAGCCAACTC ATATGGCTTT TAGCCCGCAA ATTCCAGATG TGAAACAACA AATATCAAGA ACTATCCCTA TTTCACTGGA AACCCTTGAT ACCCGTAATG TCGAATATGT TGCACGCTTT ATTGAAGAGG GCACAAAAAC ACGCTTAGTC GGCCCAAGTG AACCACCAAA ATTACAACTC GACGAAGTAT TCCGTAATGG TTTTGCTCAA GCCGGTTATC AAATTGATCC AGGAGCCAGT CATTCGGTAC AAATTCAATT AGAAGAATTA CAGATGGATG TGACCAAAAA AACCTTTGGT TATGAAGCTA AGCACAGTGT AATGATTGCC GTGCAAGCTC GAAACTCGAC TCAAGAACTC GTTAAACGCT ATAAAGCCAA AGGGACACTA AAAGGGCCAC TAACCCCCGA CTTTGCAACC CTAGAATTAG ATATGAACAA ATTACTTGGC CAGCTGTCAG GGGAAATTCT AAATGATCCC GAGCTAAACC AATTTTTACA ACAATAA
|
Protein sequence | MKRLLLTLTF PLLFVGCASQ KPTHMAFSPQ IPDVKQQISR TIPISLETLD TRNVEYVARF IEEGTKTRLV GPSEPPKLQL DEVFRNGFAQ AGYQIDPGAS HSVQIQLEEL QMDVTKKTFG YEAKHSVMIA VQARNSTQEL VKRYKAKGTL KGPLTPDFAT LELDMNKLLG QLSGEILNDP ELNQFLQQ
|
| |