| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0801 |
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| Symbol | prfA |
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| ID | 5082011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 892410 |
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| End bp | 893501 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497927 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001182330 |
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| Protein GI | 146291906 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00710906 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAT CCGTTATCCG CAAGCTGGAA GGCTTGCTCG AGCGTAATGA AGAAGTTTTG
GCCTTGCTTG GTGATGCATC TGTTATCGCT GATCAAGACC GTTTTCGTGC ATTATCAAAA
GAATATTCTC AGTTAGAAGA AGTGGTTGCA GGCTTTAAAG CTTACCAACA AGCACAGGCT
GATCTTGATT CCGCCAAGGA AATGTTGGAA GAAGATGATG CTGAAATGCG CGAGATGGCG
CAGGAAGAAA TGAAGGCTGC CAAAGCAGAA TTAGAGCGCC TTGAAAGCGA ATTGCAGATC
CTGCTTCTCC CTAAAGACCC TAACGACGAT ACCAACGCCT TTATCGAAAT TCGCGCTGGT
GCCGGTGGTG ACGAAGCGGC GATTTTTGCG GGCGATCTGT TCCGTATGTA CAGCCGTTAT
GCCGAAGCCA ATCGCTGGCA GATGGAAGTG ATGAGCTGTA ACGAAGGTGA GCACGGTGGC
TTTAAAGAAA TCATCGTTAA AGTCAGCGGT GAAGGTGCCT ACGGTAAGCT GAAATTTGAG
TCGGGCGGTC ACCGCGTACA ACGTGTGCCA GAAACCGAAT CACAAGGGCG TGTGCATACC
TCGGCTGTTA CCGTAGTGGT AATGCATGAA GTGCCAGAAG CTGAAGCGAT TTCAATCAAT
CCTGCCGATC TTAAAGTCGA TACTTTCCGA TCATCGGGTG CGGGTGGTCA ACACGTTAAC
AAAACTGACT CGGCTATTCG TATTACCCAT ATTCCAACGG GGATTGTGGT CGAGTGCCAA
GATCAACGTT CGCAACATAA AAACCGTGCT CAAGCCATGA GTGTGTTGGC TGCACGTATT
CAAGCGGTTG AGGATGAAAA ACGTCGTAGT GCTGAAGAGT CGACTCGCCG TAGTCTGGTT
GCCAGTGGTG ACCGTTCCGA GCGTGTACGT ACCTACAACT TCCCCCAAGG CCGCGTGAGT
GAGCATCGTA TTAATCTCAC TTTGTATCGC TTAAATGAAG TGATGGAAGG CGATTTAGAT
GCGATTTTAA CACCGCTGAT GCAAGAGCAT CAGGCCGATC TGTTAGCCGC ACTGGCTGAC
GAGCAGGGGT AA
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| Protein sequence | MKESVIRKLE GLLERNEEVL ALLGDASVIA DQDRFRALSK EYSQLEEVVA GFKAYQQAQA
DLDSAKEMLE EDDAEMREMA QEEMKAAKAE LERLESELQI LLLPKDPNDD TNAFIEIRAG
AGGDEAAIFA GDLFRMYSRY AEANRWQMEV MSCNEGEHGG FKEIIVKVSG EGAYGKLKFE
SGGHRVQRVP ETESQGRVHT SAVTVVVMHE VPEAEAISIN PADLKVDTFR SSGAGGQHVN
KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLAARI QAVEDEKRRS AEESTRRSLV
ASGDRSERVR TYNFPQGRVS EHRINLTLYR LNEVMEGDLD AILTPLMQEH QADLLAALAD
EQG
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