Gene Sputcn32_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0795 
Symbol 
ID5082005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp885461 
End bp885994 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID640497921 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001182324 
Protein GI146291900 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.782142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGCAG GGATACTCCC ACTCAACAGC ACAATGTCTG ACTTTGATCT TGTCGCCCTC 
GCGAGCCAAG GAAATCGTGC TGCATTTAAG CAACTGTACG TAAACCATCA TCAGCGTATT 
TATGCTCTGG CTTTACGCCT GTGTGGGCAT GTCGCTCAGG CTGAAGAAAT TACCCAAGAG 
TGTTTTATCC TCGTGTGGCA AAAATTGCCG CAATTTCGGG GGGATAGCCA ATTTTCAACT 
TGGTTACATA GCATTTGTGT GAATCAAGCT TTAAGCAGTA TTCGTAAACA GAAATCCTTT 
TGGGCGCGTT TTATTCCCAT TGAAAGTGAT ATCGAACCCC ATAGCACAGA TGAAGGGTAT 
CAAGGTTTGG ATAAACTTAT CCTCAAACTA CCTGAACGGG CTCGCATGGT GTTCGTACTT 
TGCGCCATAG AAGGATACCA ACATGAGGAA ATCGCCAAGC TGCTTGGGAT TGCCGTTGGT 
ACCAGTAAAA CGCAATATCA CAGAGCGAAG CAATTACTAC AGGAGATGCT GTAA
 
Protein sequence
MTAGILPLNS TMSDFDLVAL ASQGNRAAFK QLYVNHHQRI YALALRLCGH VAQAEEITQE 
CFILVWQKLP QFRGDSQFST WLHSICVNQA LSSIRKQKSF WARFIPIESD IEPHSTDEGY 
QGLDKLILKL PERARMVFVL CAIEGYQHEE IAKLLGIAVG TSKTQYHRAK QLLQEML