Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0780 |
Symbol | |
ID | 5081990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 868704 |
End bp | 869516 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640497906 |
Product | UBA/THIF-type NAD/FAD binding protein |
Protein accession | YP_001182309 |
Protein GI | 146291885 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000405798 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGAAG CCTATCAGAA TCGCTTTGGT GGAATTGGCC GTTTATACGG ACAAAAGGCG TTAGCAAAAT TTGCCCGTTC CCATGTGGTG GTGGTTGGTA TTGGTGGCGT AGGAACTTGG GCCGCAGAAG CATTAGCACG CAGTGGTATA GGGCAAATTA GCTTAATTGA TCTAGATGAT ATCTGCGTGA CCAACACTAA TCGCCAAATT CATGCATTAA CATCGACGAT TGGTCGCTCA AAAGTTGCAG TAATGGCACA ACGGATCCGT GATATTAATC CTGATTGCCA AGTTAATGAA ATTGAAGACT TTATCACTAT TGATAACCTA GGTGACTATT TACTTGGCGC CAAAGAAGGC GGCAACATCG ATTATGTTAT TGATTGTATT GATGCGGTAA AGCAAAAAGC AGCCCTTATT GCTTGGTGTA AACGGCAAAA GATCAAGATA GTGACAGTCG GTGGCGCGGG TGGTCAAACC GATCCTACCC AAATTCAACT CACCGATCTC GCTAAAACTT ATCAAGATCC TCTGCTGGCT AAAGTGCGTA ATATTTTACG CCGTGAATAT CACTTCTCTA AAAACGTGCA ACGTCGTTTT GCTATAGATG CCGTATTTTC CAGTGAACAG TTAGTGTATC CCCAAGCAGA TGGTTCGGTA TGTAACGCTA AGGCAACCGC CGATGGTAGC ATGCGAATGG ATTGTGCTTC CGGCTTTGGT GCTGTCACTA TGGTCACAGG CACCTTTGGT TTTGTCGCTG CAAGCCGTGT ATTATCAAGG TTGGCACACA TTGCTAATCA GGCAGACCAA TAA
|
Protein sequence | MTEAYQNRFG GIGRLYGQKA LAKFARSHVV VVGIGGVGTW AAEALARSGI GQISLIDLDD ICVTNTNRQI HALTSTIGRS KVAVMAQRIR DINPDCQVNE IEDFITIDNL GDYLLGAKEG GNIDYVIDCI DAVKQKAALI AWCKRQKIKI VTVGGAGGQT DPTQIQLTDL AKTYQDPLLA KVRNILRREY HFSKNVQRRF AIDAVFSSEQ LVYPQADGSV CNAKATADGS MRMDCASGFG AVTMVTGTFG FVAASRVLSR LAHIANQADQ
|
| |