| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0775 |
|---|
| Symbol | |
|---|
| ID | 5081984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 861414 |
|---|
| End bp | 863690 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640497900 |
|---|
| Product | DNA topoisomerase IV subunit A |
|---|
| Protein accession | YP_001182304 |
|---|
| Protein GI | 146291880 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0849191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG CAATCGAGTT AAGTTTAGAT GGGGTAGAGC AAATGCCATT GCGGCGCTTT
ACCGAAGAGG CTTATCTGAA CTATTCCATG TACGTCATTA TGGACAGGGC CTTGCCACAT
ATTGGTGATG GGCTTAAGCC TGTGCAGCGC CGAATTATTT ATGCCATGAG TGAGCTAGGG
CTATCGGCTC AGTCTAAGCA CAAAAAATCC GCCCGTACTG TGGGTGACGT ATTGGGTAAG
TATCACCCCC ATGGTGATAG TGCCTGTTAT GAGGCCATGG TATTGATGGC GCAGCCATTT
TCCTATCGAT ATCCCCTCGT TGATGGACAA GGTAACTGGG GGGCGCCCGA TGATCCTAAG
TCATTTGCAG CGATGCGTTA CACCGAGGCG CGTTTATCTA AGTTTTCAGA AGTGTTACTC
AGTGAACTGG GCCAAGGCAC TGTTGATTGG GGGGCAAACT TTGACGGAAC ACTGAAAGAA
CCCAAAGTAT TGCCGGCTCG TTTACCGCAT ATTTTACTTA ATGGTATTAC AGGCATTGCC
GTGGGAATGG CGACGGATAT TCCGCCTCAT AATGTCAGAG AATTAGTTTC TGCCTGCGTA
GCTTTGCTTG ATGATCCAAA GCTCGAACTT GAGCAATTGA TGAGTTATGT GCCTGGGCCT
GATTATCCGA CGGAAGCCGA AATTATTACC CCGTCTGCCG ATATCGCAAA AATTTATGAA
TCGGGTCGTG GTTCATTGCG AGCGCGTGCG GTTTATACTG TTGAAAGTGG TGAAATTATT
ATCACCGCTT TGCCACATCA AGCCAGTAGC GGCAAGATTT TAGAGCAAAT CGCAGGTCAA
ATGCAGGCGA AGAAATTGCC TATGGTGGCC GATTTACGCG ATGAGTCGGA TCACGAGAAT
CCAGTACGTT TAGTGGTGGT GCCACGTTCA AACCGTGTCG ATTGTGATCA GCTAATGGCA
CATTTATTTG CCACCACAGA TTTAGAAAAA AGCTTCAGAG TGAACTTAAA CGTACTTGGC
CTAGACGGTC GCCCACGGGT GAAAGGTTTA AAAACACTCT TAACCGAATG GCTAGAATTT
CGCGTAGACA CGGTTAAACG CCGGCTTGAA TATCGCTTAG ATAAAGTGCT TTCTCGGTTA
CACATACTCG AAGCTTTGAT GATCGCTTTC CTCAATATCG ATGAAGTGAT TGAAATCATT
CGTTTCCACG ATGAACCAAA AGTCGAGTTG ATGGCGCGTT TTTCGCTAAC TGATAAGCAA
GCAGAAGCGA TCCTCGAATT AAAGTTACGC CATTTAGCCA AGTTAGAAGA ATTTAAGATC
ACCGCCGAGC AGAATGAACT CGAAGCTGAG CGCGAAAAGT TGGAACAGTT ATTAGGTTCT
GAGCGGCGGT TAAAGACCTT GATCAAGAAA GAATTAATTC AAGATGCTGA AACCTATGGC
GATAATCGTC GCTCGCCCAT AGTGCAGCGC CATGAATCAC GGGCTTTAAC CGAACAAGAG
CTAACGCCGA GTGAGCCTGT AACCGTTGTA TTATCTGAGA AAGGCTGGGT GCGTTGTGCT
AAGGGGCATG ATATCGATCC GTTATCCTTA TCCTATAAGG CAGGCGATCA ATATCTGTGT
AGTGCCATGG GCCGCAGCAA TCAGGCCGCC GTATTCATTG ATTCATCAGG GCGAGCATTT
GCAACGGATA GCCATACTCT GCCATCGGCT CGGAGCCAAG GCGAGCCAAT CACCACCCGC
TTTAATATGG CGCCTGGTGA AACGATGCAA CACGTGATCA TGGGTGAAGA GGAGCAATGT
TACCTGCTAG CCACTGATGC GGGTTATGGT TTTATTTGTA CCTACAACGA TATGGTGTCA
CGCAATAAGG CGGGTAAGGC CTTGCTGAGT CTACCGACAA ACGCTAAATC ATTGACGCCT
AAGTTGATCG ACCGTACTAA AGAGATGTCA TTGTTAGCGA TCACCAATGA AGGCCGTATG
TTGCTGTTCT CGCTTGCAGC CTTACCACAA TTATCTAAGG GTAAAGGCAA TAAGATTATC
GGCATCCCCT CAGAACGCGC AAAGAGTCGT GATGAGCTAA TGACACACCT ACAACTCGTG
CCGAGTGATA CTTCTGTGAC TCTCTGGGCT GGTAAACGAA AACTGACCTT AAAGCCGAGT
GATCTTGAAC ATTATCGAGG GGAACGTGGT CGTCGTGGGG CTAAATTACC GCGTGGCTTG
CAGCGTGTTG ATAGTGTTGA ATTAGGTGAG GGTGGAGAAC CATCACTTAG CATCTAA
|
|---|
| Protein sequence | MSDAIELSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG
LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSKFSEVLL SELGQGTVDW GANFDGTLKE PKVLPARLPH ILLNGITGIA
VGMATDIPPH NVRELVSACV ALLDDPKLEL EQLMSYVPGP DYPTEAEIIT PSADIAKIYE
SGRGSLRARA VYTVESGEII ITALPHQASS GKILEQIAGQ MQAKKLPMVA DLRDESDHEN
PVRLVVVPRS NRVDCDQLMA HLFATTDLEK SFRVNLNVLG LDGRPRVKGL KTLLTEWLEF
RVDTVKRRLE YRLDKVLSRL HILEALMIAF LNIDEVIEII RFHDEPKVEL MARFSLTDKQ
AEAILELKLR HLAKLEEFKI TAEQNELEAE REKLEQLLGS ERRLKTLIKK ELIQDAETYG
DNRRSPIVQR HESRALTEQE LTPSEPVTVV LSEKGWVRCA KGHDIDPLSL SYKAGDQYLC
SAMGRSNQAA VFIDSSGRAF ATDSHTLPSA RSQGEPITTR FNMAPGETMQ HVIMGEEEQC
YLLATDAGYG FICTYNDMVS RNKAGKALLS LPTNAKSLTP KLIDRTKEMS LLAITNEGRM
LLFSLAALPQ LSKGKGNKII GIPSERAKSR DELMTHLQLV PSDTSVTLWA GKRKLTLKPS
DLEHYRGERG RRGAKLPRGL QRVDSVELGE GGEPSLSI
|
|---|
| |