| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0774 |
|---|
| Symbol | |
|---|
| ID | 5081983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 860246 |
|---|
| End bp | 861421 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640497899 |
|---|
| Product | L-sorbosone dehydrogenase, putative |
|---|
| Protein accession | YP_001182303 |
|---|
| Protein GI | 146291879 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0250675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTATA TAAAAACCAA TAATTATAAT TATTTAAAGG TGTTCTCAGC CTATACCGTT
CTATTCGTCT CTGTGATTTT ACTCCCCATT CACAGCGCGG TAGCTGCATC TCAATCGGTG
ATGATTACCG TTTCGAAGGG ATTTGGTTTA TCCCTTTACG CCTCTGATTT GGGGGATGCC
AAACAGATAG CGATGGGATC AAATGGCACC TTATTTGTGG GCTCTCATAA AAGTGGCACC
ATCCATGCCT TGGTCGATAG TAACCAAGAT GGCCGAGTTG ATAAGCGTTA TGTGATTGCA
AAAGGTTTAA AATCTCCTGA AGCAATTGCC TTTTACGATG GCGATCTGTT TGTGGCAACC
GAGAATCGGG TTATGCGCTT TATTGATATA GAGCAGCGTC TGCGTCGTCC TAGTCGCCCG
AAAGAAATCT ACAGCGATCT GCCTGCCTCT GATAAAAAAA GTACCAGAGC AATGAATTTT
GGTCCCGATG GTCGTCTTTA TATCTCTATC GGCGCACCCT GTAATGTGTG TGAAGCACCA
GCCCCCTACA GCAGCATAAT CGCGATTAAT GTTGATACAG GAGCAAATGA GCAGATTGTC
TCTGGAGTCC GTGATACAAC TGGGTTTGAT TGGTCGCCCA TCGACGGTAA ACTGTGGTTT
GCCGATCAAG GGCGGGATTG GATGGGGGAT AATTTACCCC CCGATGAAAT CAACCGTGTT
GATTCTATCG GAAGCCACTA TGGTTTTCCT TATTTACATG CCACCTCTGT TATTGAGCCC
GCTTACGAAA AGCCTAAAAA CTTAAAAATT AGTGTTCCTA TTTATGAGTT ACCTGCCCAT
GTAGCACCGA CAGGGCTGGC TTTTTATCGC GGCGTCCAAT TTCCAGAAGT TTTCCACAAT
CAATTATTTA TCGCCGAAAA TGGTTCTTGG AACCGCTCTA GTAAAGTGGG TTACCAAGTT
GTGATGCTTA AGATTGAAAA TCAACAGGTT GTGAGTCGTG AAACCGTAGT CAGTTTTCTC
GACGGAGAAT TCCCCGTTGC TCGCCCTTTT GCGTTGTTAT CAGCCGATGA TGGGGCGATG
TACATATCAG ATGATTTAAA AGGTAACGTA TATCGCTTGT TCTTTAAAGG TGGCGATAGT
ACTGAAGAAC CACAGGAACT AGAAGAAAAT GAGTGA
|
|---|
| Protein sequence | MLYIKTNNYN YLKVFSAYTV LFVSVILLPI HSAVAASQSV MITVSKGFGL SLYASDLGDA
KQIAMGSNGT LFVGSHKSGT IHALVDSNQD GRVDKRYVIA KGLKSPEAIA FYDGDLFVAT
ENRVMRFIDI EQRLRRPSRP KEIYSDLPAS DKKSTRAMNF GPDGRLYISI GAPCNVCEAP
APYSSIIAIN VDTGANEQIV SGVRDTTGFD WSPIDGKLWF ADQGRDWMGD NLPPDEINRV
DSIGSHYGFP YLHATSVIEP AYEKPKNLKI SVPIYELPAH VAPTGLAFYR GVQFPEVFHN
QLFIAENGSW NRSSKVGYQV VMLKIENQQV VSRETVVSFL DGEFPVARPF ALLSADDGAM
YISDDLKGNV YRLFFKGGDS TEEPQELEEN E
|
|---|
| |