Gene Sputcn32_0773 details

Gene Information

• Locus tag: Sputcn32_0773
• ID: 5081982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 858307
• End bp: 860193
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640497898
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_001182302
• Protein GI: 146291878
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.95291
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATC AATACACCTC TGACGCCATT GAAGTCCTTA ACGGACTCGA TCCTGTTAAA 
CGCCGTCCAG GTATGTATAC CGATACCTCC AGACCTAACC ATTTAGGCCA AGAGGTCATA 
GATAACAGTG TCGATGAAGC CTTAGCGGGT CATGCGACCA AAATTGAAGT TGTTTTACAC 
CTCGATAACT CCCTTGAAGT GACTGATGAT GGCCGTGGTA TGCCTGTGGA TATTCATCCT 
GAAGAAGGTA TTCCAGGGGT TGAGCTTATT CTGACTAAAC TGCATGCAGG CGGAAAATTT 
TCCAATAAAA ATTATCAGTT CTCAGGCGGT TTACATGGTG TTGGTATTTC GGTTGTTAAT 
GCCTTATCGC GCCGTGTTGA AGTTACAGTG CGTCGTGATG GTCAAGTTTA TGATATTGCT 
TTTGAACATG GTTTTAAGGT TGAAGAGTTA AAAGTCACAG GAACCTGTGG TCGTCGTAAT 
ACCGGCACGC GCGTGCATTT TTGGCCCGAT GCGAGCTATT TTGACTCTGC AAATTTTTCC 
AACTCAAAAC TCATTTATCT GTTGCGAGCT AAAGCCGTAC TGTGTCCTGG ATTGCGGATA 
AAATTCACCA ATAAGCAGAC CAATGAAGTC CATGAATGGT TTTACGAAAG CGGTTTAACC 
GATTATCTCA AGGCTGCTGT TGGTGATAAC GTCATGTTAC CCGAAGAGCC CTTCGTTGGC 
AGTTTTAAGG GGAAAATTGA AGCAGCCGAC TGGGCCATTA CTTGGTTGCC AGAGGGGGGT 
GAATCCATCA ATGAGAGTTA TGTTAACCTC ATTCCTACCC CACTTGGTGG CACCCATGTG 
AATGGATTTC GTCAAGGTTT GCTCGAATCT ATGCGGGAAT TCTGTGAGTT CCGTAATTTG 
ATCCCCCGTG GCATTAAATT ATCACCAGAA GATATTTGGG ACAGAGCCGC GTTTATTCTG 
TCGGTAAAAA TGCAGGATCC GCAATTTGCT GGGCAAACTA AAGAGAAACT CTCCAGCCGC 
CAGTGTTCCG CTTTTGTTTC AGGTATAGTA CGGGATGCTT TTTCACTCTG GTTAAACTCG 
AATACGGAAT TAGCTGAATC TTTAGCGGAA TTATGCATTA ACAATGCCCA GCGTCGTCTT 
AAAGCTGCAA AAAAAGTGGC GCGTAAAAAG GTGACGTCAG GCCCCGCATT ACCAGGGAAA 
TTGACGGATT GTAGCGGGCA AGATCCGATG CGGGGCGAAT TATTTCTCGT CGAAGGGGAC 
TCCGCAGGCG GTAGTGCGAA GCAGGCTCGG GATCGTGAGT TTCAAGCGAT TATGCCGCTG 
CGTGGTAAAA TCCTTAACAC TTGGGAAGTT GACGCTTCTC AAGTATTGGC TTCTCAAGAA 
GTGCATGATA TTTCAGTGGC TATTGGTTGT GATCCCGATT GCAATGATAT TTCAGAGTTG 
CGTTATGGCA AGATTTGTAT TTTGGCGGAT GCGGACTCCG ATGGGTTGCA TATTGCCACC 
TTACTCTGTG CGCTATTTTT GAAGCATTAC CGTATATTGG TCGAACAGGG TCATGTGTAT 
ATTGCTATGC CGCCACTCTT TCGTATCGAT ATAGGTAAAG ACGTATACTA CGCCTTAGAC 
GAGGCTGAAA AAGAAGGTAT TCTTGACCGT ATTAGCGCTG AAAATAAAAA AGGAAAAGTT 
CAAGTGACGC GCTTTAAGGG CTTGGGTGAG ATGAACCCCT TACAGCTTCG TGAAACAACC 
ATGGATCCTA ATACCCGTCG TTTAGTACAG TTGACGATAG ATGATGTGGA AGAAACCGAT 
TCTTTGATGG ATATGTTACT TGCGAAAAAA CGTTCTCCGG ACCGTAAATC TTGGCTCGAA 
GATAAGGGTG ACATGGCTTT ACTTTAA 

 

Protein sequence

MTNQYTSDAI EVLNGLDPVK RRPGMYTDTS RPNHLGQEVI DNSVDEALAG HATKIEVVLH 
LDNSLEVTDD GRGMPVDIHP EEGIPGVELI LTKLHAGGKF SNKNYQFSGG LHGVGISVVN 
ALSRRVEVTV RRDGQVYDIA FEHGFKVEEL KVTGTCGRRN TGTRVHFWPD ASYFDSANFS 
NSKLIYLLRA KAVLCPGLRI KFTNKQTNEV HEWFYESGLT DYLKAAVGDN VMLPEEPFVG 
SFKGKIEAAD WAITWLPEGG ESINESYVNL IPTPLGGTHV NGFRQGLLES MREFCEFRNL 
IPRGIKLSPE DIWDRAAFIL SVKMQDPQFA GQTKEKLSSR QCSAFVSGIV RDAFSLWLNS 
NTELAESLAE LCINNAQRRL KAAKKVARKK VTSGPALPGK LTDCSGQDPM RGELFLVEGD 
SAGGSAKQAR DREFQAIMPL RGKILNTWEV DASQVLASQE VHDISVAIGC DPDCNDISEL 
RYGKICILAD ADSDGLHIAT LLCALFLKHY RILVEQGHVY IAMPPLFRID IGKDVYYALD 
EAEKEGILDR ISAENKKGKV QVTRFKGLGE MNPLQLRETT MDPNTRRLVQ LTIDDVEETD 
SLMDMLLAKK RSPDRKSWLE DKGDMALL