| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0753 |
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| Symbol | rpsF |
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| ID | 5082061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 841484 |
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| End bp | 841879 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497878 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001182282 |
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| Protein GI | 146291858 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000769486 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ACGAAATCGT ATTTATGGTT CACCCAGATC AAAGTGAACA AGTACCAGGT
ATGATTGAGC GTTACACAGG TGTTATCACC GAAGCTAACG GCACAATCCA CCGTTTAGAA
GATTGGGGCC GTCGCCAATT GGCTTACCCA ATCCAAGATC TGCATAAAGC TCACTACGTT
CTGATGAACG TTGAAGCACC TGCAGAAACG ATCGAAGAGC TAGAAACAGC TTTCCGTTTC
AACGACGCAG TTCTGCGTAA CATGGTAATG CGTACTAAAG TTGCCGTTAC TGAAGCATCT
CCAATGGCTA GAGCTAGAGA TGAGCGCGAT TCACGTCGTG GCCCAGCTGG CGAACGCTCA
TACGATGAAG CTCACGCTGA AGAAATCGGT GAGTAA
|
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| Protein sequence | MRHYEIVFMV HPDQSEQVPG MIERYTGVIT EANGTIHRLE DWGRRQLAYP IQDLHKAHYV
LMNVEAPAET IEELETAFRF NDAVLRNMVM RTKVAVTEAS PMARARDERD SRRGPAGERS
YDEAHAEEIG E
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