Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0752 |
Symbol | |
ID | 5082060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 840527 |
End bp | 841270 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640497877 |
Product | hypothetical protein |
Protein accession | YP_001182281 |
Protein GI | 146291857 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00298481 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAG TTACCGCTCT TATCAGTTTA TGTTCTCTTT CAATGCCGGC ATTTGCGCTC GTCCCCCCCG ACTATCAGGA GCCTCCTAGC GACTTTACGG CTGAAGTCGA AGCAGGATTA CAGCTAAACA CAGGTAATAC CGAATCGAGT AGTTTTAATG GCCGAACCCA GCTCATTTAC GACACGAAAC AAACCAAACA AGAAGCCACA TTAAAAGCTT ACTTTGCATC CGAAAAAAGC CAAACCACTT CAGAAAAATA TGAACTGCAA TTGCAGTCAA ACTATAAGCT CAATAAAGGG TATGTTTTTG GCCGTGGGGA CTTTACGTGG GACCAATTTG GTAGCTATAC CCAGATATCA ACACTTTCAA GTGGTTATGG TTTTAATGCT ATTAGTAATC ATAAAACAAA GCTGAGTCTC GAAATAGGTC CTGGTTACCG TTATAACTTA CCCGCTGAGT CTACTTCTGT TCCCGATCCA GACGCAGAAA AAGATGCCAT TTTACGTACA GCGGCGAAGT TTTCTCAAAA ACTACAGGAA TACACGAGTA TCAATGCCGA TCTCACCGCT GAAGTTGGGG AAAATAACAA CACACTGACT TTAGATATGA GCTACAAAAA CCTCGTATTT CAGGATTGGG CGTTTAAAAT TGGAATGAAC ATTAAATACA CTGAAGTGGT TCCCGAAGGG AGTCAGCAAA CTGATACGAT AACGACATTC AATCTACTCT ATACATTTAG GTAA
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Protein sequence | MLKVTALISL CSLSMPAFAL VPPDYQEPPS DFTAEVEAGL QLNTGNTESS SFNGRTQLIY DTKQTKQEAT LKAYFASEKS QTTSEKYELQ LQSNYKLNKG YVFGRGDFTW DQFGSYTQIS TLSSGYGFNA ISNHKTKLSL EIGPGYRYNL PAESTSVPDP DAEKDAILRT AAKFSQKLQE YTSINADLTA EVGENNNTLT LDMSYKNLVF QDWAFKIGMN IKYTEVVPEG SQQTDTITTF NLLYTFR
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