Gene Sputcn32_0744 details

Gene Information

• Locus tag: Sputcn32_0744
• Symbol: rplM
• ID: 5082052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 832235
• End bp: 832663
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640497869
• Product: 50S ribosomal protein L13
• Protein accession: YP_001182273
• Protein GI: 146291849
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000518641
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACTT TTACTGCTAC ACCAGAAACT GTAACTCGTG ACTGGTTCGT CGTTGATGCA 
GACGGCAAAA CTTTAGGTCG TATCGCTACT GAAATTGCTA CCCGTTTACG CGGCAAGCAT 
AAGCCAGAAT ACACTCCTCA CGTTGATACT GGTGATTACA TCATCGTTAT CAATGCTGAA 
AAAGTCACTG TTACTGGTAA CAAAGCGAAA GGCAAAACGT ACTACTCGCA TTCAGGCTTC 
CCTGGTGGCA TTAAGCAAAT CAGCTTTGAA AAGCTGCAAG CGCATAAGCC AGAAATGATC 
ATCGAGAAGG CAGTTAAGGG TATGTTACCA AAAGGTCCTC TGGGCCGTGC CATGTTCCGT 
AAACTGAAAG TTTACGCTGG CGCAGAACAT AACCACGCTG CACAACAACC TCAAGTTCTT 
GATATCTAA 

 

Protein sequence

MKTFTATPET VTRDWFVVDA DGKTLGRIAT EIATRLRGKH KPEYTPHVDT GDYIIVINAE 
KVTVTGNKAK GKTYYSHSGF PGGIKQISFE KLQAHKPEMI IEKAVKGMLP KGPLGRAMFR 
KLKVYAGAEH NHAAQQPQVL DI