Gene Sputcn32_0742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0742 
Symbol 
ID5082050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp829060 
End bp830415 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content47% 
IMG OID640497867 
Productprotease Do 
Protein accessionYP_001182271 
Protein GI146291847 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0204105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AACTATCTGT ACTTTCAGCT GCAATGTTAG CCGCAACCCT GACTATGATG 
CCTGCTATCT CACAGGCCGC AATTCCACAA ACTGTTGATG GACAGTCGAT GCCAAGTCTT
GCGCCCATGC TTGAGCGCGC AACGCCAGCC GTCGTCTCTG TGGCTGTCAC TGGTACCCAT
GTTTCTAAAC AAAGAGTACC TGATGTATTT CGTTACTTCT TTGGCCCTAA TGTGCCACAG
GAACAAATTC AAGAACGTCC TTTTAGAGGA TTAGGTTCCG GCGTCATTAT TGATGCTGAT
AAAGGTTATA TTGTTACCAA TAACCATGTG ATTAATGGCG CAGATGATAT CCAAGTTGGT
TTACACGATG GTCGAGAGGT CAAAGCGAAA CTCATTGGTG CCGATGCCGA ATCGGATATA
GCCTTATTGC AAATTGAGGC TAAAAATCTT GTCGCTATCA AGTCATCAGA CTCCGATGAT
TTACGCGTAG GTGACTTTGC CGTTGCCATT GGTAACCCTT TCGGTTTAGG TCAGACTGTG
ACATCAGGTA TCGTCAGCGC CTTAGGTCGT AGTGGCCTAG GAATTGAAAT GCTTGAAAAC
TTCATTCAAA CCGATGCGGC AATTAATAGC GGTAACTCAG GTGGTGCCCT TGTTAACCTT
AATGGCGAAT TGATTGGTAT CAATACTGCT ATTGTGGCTC CGGGAGGCGG TAACGTCGGT
ATTGGTTTTG CAATTCCTGC CAATATGGTG AAAAACTTAG TCGCACAGAT TGTCGAACAT
GGTGAAGTAC GTCGTGGTGT GCTTGGTATT TCAGGCCGCG ATCTCGATAG TCAACTTGCT
CAAGGTTTTG GTTTAGATAC TCAGCACGGT GGCTTTGTCA ATGAAGTGAC CGCGGGTAGC
GCTGCAGAAA AGGCAGGTAT TAAAGCGGGC GATATTATTG TCAGTGTTGA TAGCCGGGGC
ATTAAGTCTT TCCAAGAGCT ACGTGCTAAG GTGGCGACTA TGGGAGCGGG TGCAAAAGTC
GAGTTAGGGA TCATCCGCGA TGGTGATAAA AAAACCGTTA AAGTCACCTT AGGTGAAGCA
AGCCAAACGA GTGATTCGGC CGCAGGCGCG GTGCACCCTA TGTTACAAGG TGCCGCCTTA
GAAAATGCTG CCAAGGGCGG AGTGACGATT ACTGATGTTG CTCAAGGTTC CCCCGCCGCG
ATGAGTGGCT TACAGAAAGG CGATATCATA GTGGGAATTA ACCGCACTGC AATTAAAGAT
CTTAAGGCAC TCAAAGCCCA TCTTAAGGAT CAAGAAGGTG CCGTAGCGCT AAAAATATTG
CGCGATAAGA GCATGTTATA TTTAGTACTG CGTTAA
 
Protein sequence
MKTKLSVLSA AMLAATLTMM PAISQAAIPQ TVDGQSMPSL APMLERATPA VVSVAVTGTH 
VSKQRVPDVF RYFFGPNVPQ EQIQERPFRG LGSGVIIDAD KGYIVTNNHV INGADDIQVG
LHDGREVKAK LIGADAESDI ALLQIEAKNL VAIKSSDSDD LRVGDFAVAI GNPFGLGQTV
TSGIVSALGR SGLGIEMLEN FIQTDAAINS GNSGGALVNL NGELIGINTA IVAPGGGNVG
IGFAIPANMV KNLVAQIVEH GEVRRGVLGI SGRDLDSQLA QGFGLDTQHG GFVNEVTAGS
AAEKAGIKAG DIIVSVDSRG IKSFQELRAK VATMGAGAKV ELGIIRDGDK KTVKVTLGEA
SQTSDSAAGA VHPMLQGAAL ENAAKGGVTI TDVAQGSPAA MSGLQKGDII VGINRTAIKD
LKALKAHLKD QEGAVALKIL RDKSMLYLVL R