| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0724 |
|---|
| Symbol | |
|---|
| ID | 5082032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 812243 |
|---|
| End bp | 812908 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640497849 |
|---|
| Product | toluene tolerance family protein |
|---|
| Protein accession | YP_001182253 |
|---|
| Protein GI | 146291829 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA GCTTATCTCG CTTTTTACTG CCGTTAGTTA TGGTCTTAGG TACAGCAAGT
GCGCTTGCTT CTGATGCCTC GGTAAACACT AAAGATCCAT ATGCCATGGT AAAATCCGTT
GCGAATAAAA CCTTCGATCG TTTCCATAAA GATAAAGCAT TGATCGATGC GAATACCGAT
CATCTGAAAG TCATCGTCCA TGAAGAACTC ATGCCCTACG TTGATTATAA ATATGCCTCT
TACAAGGTTT TAGGCCAGTA CCTTAAAGAT TCGACTGAAG ATCAGCGTAA TCGTTTTGTT
GATGCTTTTG AGGGATATTT AGTTACCACC TATGCACAAG CATTTACTGA ATATACGAAT
CAGAAAGTTG AATTTTCCCC CGGCATTGAT TTCAGCAATG AGAAAATTGT CGACGTCAAT
GTGCAGATCA TCGAGCCGGG ACGTCCACCG ATTAAACTGT TGTTTAAAGT GCGTCGTTTA
AAGGATGATT CATGGAAGGC GTTTGATTTA GTCGCTGAAG GTGTGAGTTT ACTGTCATCT
AAACAATCTG AAATTTCTAA TCTTATTCGT CAACAGGGGA TTGATCCTGT CATTAAGATG
CTAGAAGAAC GGACTAAAGA CAAAGTCACC AAACAAGCTA AATCATCTGG GAACTCAATG
TCGTGA
|
|---|
| Protein sequence | MFKSLSRFLL PLVMVLGTAS ALASDASVNT KDPYAMVKSV ANKTFDRFHK DKALIDANTD
HLKVIVHEEL MPYVDYKYAS YKVLGQYLKD STEDQRNRFV DAFEGYLVTT YAQAFTEYTN
QKVEFSPGID FSNEKIVDVN VQIIEPGRPP IKLLFKVRRL KDDSWKAFDL VAEGVSLLSS
KQSEISNLIR QQGIDPVIKM LEERTKDKVT KQAKSSGNSM S
|
|---|
| |