| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0714 |
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| Symbol | |
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| ID | 5082022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 804198 |
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| End bp | 804485 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640497839 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001182243 |
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| Protein GI | 146291819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000235034 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATAA AGCTCATTGG ACACCATATC GAGATTACTG AATCGTTACG GGCATATGTA
GAGGAAAAAT TTTCAAAACT TGAACGCCAT TTCGAACAGA TCCATAATGT GCACGTTGTG
CTCAATGTTG AGAAAATGCA ACAGATTGCC GAAGCGCGAA TCAACCTCAC CGGTGGTGAA
GTTTTTGCAA CTTCAGAGCA TACTGACATG TATGCTGCCA TAGACGTCCT GATCGATAAA
CTTGATCGTC AGGTTATTAA ACACAAAGAG AAGTTAACAA AACACTAA
|
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| Protein sequence | MQIKLIGHHI EITESLRAYV EEKFSKLERH FEQIHNVHVV LNVEKMQQIA EARINLTGGE
VFATSEHTDM YAAIDVLIDK LDRQVIKHKE KLTKH
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