| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0701 |
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| Symbol | groEL |
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| ID | 5082109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 789516 |
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| End bp | 791153 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497826 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001182230 |
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| Protein GI | 146291806 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.149625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTA AAGAAGTTGT ATTTGGTAAT GACGCTCGCG TAAAAATGTT GGCTGGCGTA
AACATTCTCG CGAACGCAGT GAAAGTGACC TTAGGCCCTA AAGGCCGTAA CGTGGTATTA
GACAAGAGCT TCGGCTCACC ACTGATCACT AAAGACGGTG TTTCTGTTGC CAAAGAAATC
GAATTAGAAG ACAAATTCGA AAACATGGGC GCGCAAATGG TGAAAGAAGT TGCTTCTAAA
GCCAACGACG CCGCCGGTGA CGGTACTACT ACTGCAACTG TACTGGCTCA AGCCATTGTG
ACTGAAGGCT TAAAAGCCGT TGCAGCCGGT ATGAACCCAA TGGACCTGAA GCGCGGAATC
GACAAAGCCG TTATCGCTGC CGTTGCTGAA TTAAAAGCCT TATCACAACC TTGTGCAGAT
TCAAAAGCGA TTGCACAAGT TGCGACTATC TCTGCAAACT CTGACGAATC TATCGGTGAA
ATCATCGCTA CTGCGATGGA AAAAGTCGGT AAAGAAGGCG TGATCACAGT CGAAGAAGGC
CAAGCGCTGG AAAACGAACT GGACGTAGTA GAAGGTATGC AGTTTGACCG TGGTTACCTA
TCTCCATACT TTATCAACAA GCCAGAAACA GGCAGCGTTG AATTAGATCA CCCATTCGTC
CTGTTAGTAG ACAAGAAAAT CTCTAACATT CGCGAACTGT TACCTATCCT TGAAGGTCTG
GCAAAAACAG GTAAGCCATT GCTTATCGTT GCTGAAGACG TTGAAGGCGA AGCATTAGCA
ACTTTAGTTG TGAACAACAT GCGCGGTATC GTGAAAGTGG CTGCCGTTAA AGCCCCAGGC
TTTGGCGATC GTCGTAAGGC AATGCTGCAA GACGTAGCAA TCCTGACTGG CGGTACTGTT
ATTGCTGAAG AAATCGGCCT AGAGCTTGAA AAAGCAACCC TAGAAGATTT AGGTACAGCT
AAGCGTGTTG TGATCACTAA AGACAACACC ACCATCATCG ATGGTAATGG CGAGCAAGCG
CAAATCGAAG CGCGTGTAAG CCAAATCAAG CAACAAATCG AAGAATCAAC CTCAGACTAC
GACAAAGAAA AACTGCAAGA GCGTATGGCT AAATTAGCTG GCGGCGTAGC AGTTATCAAA
GTTGGCGCAG CGACTGAAGT TGAAATGAAA GAGAAAAAAG CACGCGTTGA AGATGCGCTG
CATGCCACTC GCGCTGCGGT AGAAGAAGGC GTGGTTCCTG GCGGTGGTGT TGCTCTGGTT
CGCGTAGCGT CTAAGATCGC TGAACTTGAA GTATTAAACG AAGACCAAAA ACACGGTGTG
GTTATTGCAC TGCGTGCAAT GGAAGCGCCA CTGCGTCAAA TCGCCACTAA CGCGGGTGAA
GAAGCGTCAG TTGTTGCTAA CACAGTGAAG AACGGCAGCG GTAACTTCGG TTATAACGCC
GGTAACGACA CTTACGGTGA CATGTTAGAA ATGGGTATCC TTGACCCAAC TAAAGTGACT
CGTTGTGCGT TGCAATTCGC AGCATCAATT GCTGGCCTGA TGATCACCAC AGAAGCTATG
GTTGCTGAGA TCCCACAAAA TTCTGCGCCA GATATGGGCG GAATGGGTGG TATGGGCGGA
ATGGGCGGCA TGATGTGA
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| Protein sequence | MAAKEVVFGN DARVKMLAGV NILANAVKVT LGPKGRNVVL DKSFGSPLIT KDGVSVAKEI
ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQAIV TEGLKAVAAG MNPMDLKRGI
DKAVIAAVAE LKALSQPCAD SKAIAQVATI SANSDESIGE IIATAMEKVG KEGVITVEEG
QALENELDVV EGMQFDRGYL SPYFINKPET GSVELDHPFV LLVDKKISNI RELLPILEGL
AKTGKPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DVAILTGGTV
IAEEIGLELE KATLEDLGTA KRVVITKDNT TIIDGNGEQA QIEARVSQIK QQIEESTSDY
DKEKLQERMA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALV
RVASKIAELE VLNEDQKHGV VIALRAMEAP LRQIATNAGE EASVVANTVK NGSGNFGYNA
GNDTYGDMLE MGILDPTKVT RCALQFAASI AGLMITTEAM VAEIPQNSAP DMGGMGGMGG
MGGMM
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