| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0699 |
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| Symbol | |
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| ID | 5082107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 787572 |
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| End bp | 788942 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497824 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001182228 |
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| Protein GI | 146291804 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0250563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACA GACACGGGCT GCTCACCGCG CCAATTGGTC GTGTACTGCT CAACATGAGC
CTCCCTAACT TGATTGGCAT TATGACCATT CTAGGTTTTA GCCTCGCTGA CACTTTTTTT
ATCAGTCAAT TAGGGACAGA GCCTTTAGCT GCCATCAGTT TTACCTTTCC GGTTACCCTG
ATTATTTCGA GCATTGCTAT CGGTATTGGT GCAGGTGTTT CAACCAACCT TGGGCGTCTT
ATCGGCTCAG GAAATGCTCC TAAAGCCAAA GTATTTTTAC ACGATGCCTT ACTGCTGACG
TTTATATTAA CAGCCAGTTT ATCGGCCCTT GGCAGCATTT TTATTACACC GCTGTTTAGT
TTGCTTGGGG CGAATGAAAG CAGTCTGCCG CTGATCCGCG ACTATATGAT TTACTGGTAT
TTAGCCGCAC CATTGCTGGT CGTGCTAATG GTGGGTAATC AAGGTTTACG CTCAACTGGT
GACACCCGCT CACCTGCAAT GATCATGTCA CTTGCGGCGA TCATTAACCT TATTCTGGAT
CCTTTACTTA TCTTTGGGAT TGGCCCATTT CCACGCTTAG AAATTCAAGG GGCTGCCATT
GCAACCCTTA TTGCTTGGGT TGTGGCTTTA TCGCTATCCA GTTATTTGTT GATTATTAAG
CGTAAAATGT TGGAGTGGGC CGTTTTCGAT ATCGATAGAA TGCGCGCCAA TTGGAGTAAA
CTTGCCCATA TTGCACAACC TGCGGCATTA ATGAATTTAA TTAACCCGCT TGCCAATGCC
GTGATCATGG CCATGTTGGC ACATATAGAC CACAGCGCTG TTGCCGCCTT TGGAGCGGGT
ACGCGGTTAG AGTCAGTATT ATTGATTGTC GTAATGGCAC TGTCGTCAAG CCTAATGCCC
TTTATTGCGC AAAACTTAGG TGCAGGGCAA CCACAAAGAG CCAAAGAAGC ACTGCTGTTA
TCACTTAAAT TTATCTTTAT CTTCCAAACC TTACTCTATA TACCACTGGT GTTTTTGGCT
GAACCCATAG CACACTTATT TAGTACGGAT CCGCAAGTAT TGGAATGGCT TAGTTTTTAT
ATTTTAGTAC TGCCCTGCGC TTACGGGCCT TTGGGGATAG TGATTATTTT CGCTACCGCC
CTAAACGCCT ATCACAGACC CATAAACTCC TTGGTGATTA ATCTGTGCCG CTTAGTATTG
CTGATGTTGC CATTGGCGGC ATTGGGCTCC TATATTGGCG GGGTAAAAGG CTTATTGCTC
GCGCTACCTG TGACCAATAT TTTAATGGGA ATTGCCTGCT ATTGGCTGGC GCAGCAGATA
TGTGAGCCTG TAAAAGTCAC TACTGTAAAC GCCAATAGTG CGACCCATTA A
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| Protein sequence | MKDRHGLLTA PIGRVLLNMS LPNLIGIMTI LGFSLADTFF ISQLGTEPLA AISFTFPVTL
IISSIAIGIG AGVSTNLGRL IGSGNAPKAK VFLHDALLLT FILTASLSAL GSIFITPLFS
LLGANESSLP LIRDYMIYWY LAAPLLVVLM VGNQGLRSTG DTRSPAMIMS LAAIINLILD
PLLIFGIGPF PRLEIQGAAI ATLIAWVVAL SLSSYLLIIK RKMLEWAVFD IDRMRANWSK
LAHIAQPAAL MNLINPLANA VIMAMLAHID HSAVAAFGAG TRLESVLLIV VMALSSSLMP
FIAQNLGAGQ PQRAKEALLL SLKFIFIFQT LLYIPLVFLA EPIAHLFSTD PQVLEWLSFY
ILVLPCAYGP LGIVIIFATA LNAYHRPINS LVINLCRLVL LMLPLAALGS YIGGVKGLLL
ALPVTNILMG IACYWLAQQI CEPVKVTTVN ANSATH
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