| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0654 |
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| Symbol | |
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| ID | 5080444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 725815 |
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| End bp | 728022 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640497779 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001182183 |
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| Protein GI | 146291759 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.999048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATG GTTTAGCCAA TCCACTCCAA CAGGCACTCG TCACTATTTT TAGCGAAACC
CCGCTAGAAA CCTTAGAGCA GAATGTTGAC CGAGCCCTAG AGACTATTAC CTTACAACTC
CACTGTGATG GAGTGTTTGT GTTGACAGGA AGCCAGTCTC TTGACCATTT ACGCACTCGA
AATCTTTATT TAAAACCGCA ATTTACGAAG GGACAACAGA TCCGAGTTTG GCCTTTAGCA
CGTATGCCTT TTTTTCGTTC GTTGGTACGT TCACCAAGAT TATTAAATGT GCCTGATGTT
AATCGGTTGC CCGATGAGGC ATTGGCTGAA AGAGCCCTAC TAAAAGATTG GAATGTAAAA
AGTTTATTGG TTTTACCTCC CGTCATTTTT GGCGAAACAC GGATAGCTCT AGGGGCGGTT
AACTGCTCTG AGTGTTGTGA TTGGAGTAAT GCGTTTATTG ATGAGTTTAG TCATGCCGCA
GTGATGATTG GCTCTGCAAT GGAATTGACT CGAATTGCCC AAAATATGCT GGCAAGTGAA
TATAAATACC GTCAAGTATT TAATCAGTTA CCTTTAGCCT GTGCATTACT CGATAAACAT
AATCAACTGG CAATGTTAAA TAAAGTGGCG TTGCAAACTT TACCTGTGCA GCACGGATAT
GATTTATTCC AGATGGTACG AGAAGAAGAA CACGCCATGC TCAACGATAC CTTGCATATG
GTACGTGAGG GCGTCTTAGG TCAAGCTTGG TGTGAGTTAC CGTTAAAATC GGTGCATCAA
CTCGATTGGT TAAGGTTAAG TTTCAGCCAG ATCCATGGTG ATAAAAATAC GCTGGTGATG
ATAGCTGAAG ATGTGAGTGA AAAGTATCGC TTAGCCGATG AACTCTCTTT CCATGCTAAT
TACGATGCAC TGACTGGCTT ACCCAACCGA CTACATTTTG AGGCATTGCT TGAGAATCTT
CTACAAGCAA GGGATGACAT GCCGACCTGC GTTGCTTTTA TTGATGTCGA CCAATTTCAA
GTCATCAATA ATGTGAGCGG CCATCAAGCG GGAGATAAAC TCCTGTGTCA GTTGGCTTTG
CGTCTAAAAC AACTTGTCCG CAAAGGCGAT ATTGTTGCGC GCCTTGGTGG TGATGAATTT
GGTATTTTGA TGCATTACAG CAACGTGGAT TCGGCGCAGC ATATTGCTAA TCGCATTTGT
ACCCAGCTTG CAACCCATGA GTTTATTTGG GAGAACCGTT GCCATAATGT CAGTGTGAGT
ATGGGCATTG CCAAGCTCGA TAAATCGGCT GCTGATATTT ACACTGTGAT GAGTCAAGCG
GATGCGGCAT GTCGCCTTGC TAAAGATAAA GGGCGCAATG GTTGGCATTT ATACAGCGCC
AAAGATCCTA AGATGACTCG ACTTTATACT GAGATGATGG CCTCAGTTGA TATTGTCAGT
GCCCTTGCAT TGAATCAGTT TGAGCTTTAT TTTCAAATTA TTACACCATT AAATCGCCGT
GAGTCAGGTC TGCATTTAGA AATCTTACTG CGTATGGTGC AGCCGAACGG CACTATTGTT
TCTCCTGCGA TTTTCTTGCC CGCGGCTGAG CGTTATAACT TAGCTTCTAA AGTCGATCTT
TGGGTGATAG ATAATTTACT TAAATGGGGT AGTAGTCATT TAGCGATTTG GCAGCAGTTG
GATCTTGTTT CCGTTAATTT ATCGGCCACG TCTTTAGGAG ACAGTGAGTT TATGAACTGG
CTTGAAATGC GCTTAATGAC CGAGCCGGAG TTGGTGGACA AACTTTGTAT TGAGATTACT
GAAACGGCAG CGGTGAGTCA GCTAGAACAG GCGACAAAAT TGATTGAAGT ATTACGTCCC
CTTAATTGTC AGTTAGCTCT AGATGATTTT GGAGCTGGTT TTTCAAGCTT TGCCTATCTC
AAACGTCTTA ATGTGGATTT TGTCAAAATT GATGGTCAGT TTGTCCTTAA TATTTGTGAG
GATCCCGCGG ATCAAGCTAT TGTTAAGGCT ATCTGTCAGT TGGGGCAAGA CATGGGATTT
GATATTATCG CTGAGTTTGT GGAGTCCCCC GAAATTGGCC TTAAATTACA GATGCTCGGG
GTCGACTACG CCCAAGGTTA CGCGATTAAC AAACCCACTC GTTTATCTAA TTTAACTTCA
GGGCTAAGTC GGCCTTGGCT TGATATGAAC AGTGGTTTAC AGCCTTAA
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| Protein sequence | MSDGLANPLQ QALVTIFSET PLETLEQNVD RALETITLQL HCDGVFVLTG SQSLDHLRTR
NLYLKPQFTK GQQIRVWPLA RMPFFRSLVR SPRLLNVPDV NRLPDEALAE RALLKDWNVK
SLLVLPPVIF GETRIALGAV NCSECCDWSN AFIDEFSHAA VMIGSAMELT RIAQNMLASE
YKYRQVFNQL PLACALLDKH NQLAMLNKVA LQTLPVQHGY DLFQMVREEE HAMLNDTLHM
VREGVLGQAW CELPLKSVHQ LDWLRLSFSQ IHGDKNTLVM IAEDVSEKYR LADELSFHAN
YDALTGLPNR LHFEALLENL LQARDDMPTC VAFIDVDQFQ VINNVSGHQA GDKLLCQLAL
RLKQLVRKGD IVARLGGDEF GILMHYSNVD SAQHIANRIC TQLATHEFIW ENRCHNVSVS
MGIAKLDKSA ADIYTVMSQA DAACRLAKDK GRNGWHLYSA KDPKMTRLYT EMMASVDIVS
ALALNQFELY FQIITPLNRR ESGLHLEILL RMVQPNGTIV SPAIFLPAAE RYNLASKVDL
WVIDNLLKWG SSHLAIWQQL DLVSVNLSAT SLGDSEFMNW LEMRLMTEPE LVDKLCIEIT
ETAAVSQLEQ ATKLIEVLRP LNCQLALDDF GAGFSSFAYL KRLNVDFVKI DGQFVLNICE
DPADQAIVKA ICQLGQDMGF DIIAEFVESP EIGLKLQMLG VDYAQGYAIN KPTRLSNLTS
GLSRPWLDMN SGLQP
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