Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0649 |
Symbol | |
ID | 5080439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 721289 |
End bp | 722617 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640497774 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001182178 |
Protein GI | 146291754 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000150109 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCCA TTCGCACTAA GCTCAGTTTA TGGTTAACGG GCTTAATAGT GCTGGGCACA GTGATTGGAC TCATCTTATT TGAGTCCATG TTGCGCCAAG CTTTTCACGA TTCGATTATC AATCGTTTAG AAGAAGATCT TGAACATATC ATGCTGGCGA CCCATATCAA TGATGGTGAT ATCAGCATAG ATCAAAGCCA GCTTTCCAGT TTTTATAAAC CTGCCTATTC GGGCCGCTAT TTCCAGCTTA ATCTGCCAAA TGAAGTGATT CGCTCACGTT CATTATGGGA CATGCAATTA GATATTGAAC CATTAGCCCC AAATCAAACC CGAGTTTGGC AAGCTAAAGG ACCAAAAAAC AATGATATGC AACTGTTATC CTTGGGATTA AATTCGAGTA GCGCCAATGT CACAGCCACC CTGACAGTGG CGCAGGATCT CAGTATTGGT AGACGCGTAT TTAGTGAGGT TTATGGCACT AAACTTGGGG TCAATCTAGC GATGCTAGTA GCGATGATCA TGGGGATCTT TTTAATTCTA CGTCAGTCTT TTAAACCCGT TAGGCAAATC CAAGATGCGC TATCCCGTTT ACAGCAAGGG GAGATCAACG CTCTCGAACT GAGTAATATC CCCCCGGAAG TAAGGCCACT AGCAAAAACC TATAATGAAC TACTCGAATA CACCGCCAAG CAAATTGAAC GTAGTCGCAA TAACTTAGGT AACTTGAGCC ATGGGCTCAA AACGCCACTG GCGGTGATGC AGCAACAGGT TGAAGCACTT GGGCTTAAAG ATCCTGAAAC CGCCATAGCC CTGCAGCAGC AACTTGATTC GATTCACAAG ATGGTCGAGC GTAAACTGGC GGCGGCAAGG ATCACAGGCG ACATGCTTCC TGCGGCGCAA TTAGTGATCC CAAGGGATTT ACACAGCCTA GCCAATACCC TTAATAAGGT CCACCGCAAC AAGTCCATCG AATGCAATTT TGAACTCGAT CCCAATATCC TACGGCTGCC GATCCACAGA GAGGATGGCA TGGAGCTTCT AGGCAACCTA TTAGACAACG CCTTTAAGTG GGCTAAGCAC CAAGTGAGTA TTCAGCTATC ACGTCAGCAA GAGCGTCTCT GCCTTTGTAT CGATGATGAT GGCCCTGGGG TTGCTGATGA TGAGCTAGAT AAACTCACAC AGCGGGGAAC AAGATTAGAT GAAGCTGTAA TGGGTCACGG CTTAGGTTTA TCGATAGTGA AAGAAATTGC CGAGCAATAT GAGATTGAAC TTAAATTTGA TCACAGCACT CGCTTAGGTG GACTGAGGAT CGAACTGACC TTTAGCTAG
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Protein sequence | MISIRTKLSL WLTGLIVLGT VIGLILFESM LRQAFHDSII NRLEEDLEHI MLATHINDGD ISIDQSQLSS FYKPAYSGRY FQLNLPNEVI RSRSLWDMQL DIEPLAPNQT RVWQAKGPKN NDMQLLSLGL NSSSANVTAT LTVAQDLSIG RRVFSEVYGT KLGVNLAMLV AMIMGIFLIL RQSFKPVRQI QDALSRLQQG EINALELSNI PPEVRPLAKT YNELLEYTAK QIERSRNNLG NLSHGLKTPL AVMQQQVEAL GLKDPETAIA LQQQLDSIHK MVERKLAAAR ITGDMLPAAQ LVIPRDLHSL ANTLNKVHRN KSIECNFELD PNILRLPIHR EDGMELLGNL LDNAFKWAKH QVSIQLSRQQ ERLCLCIDDD GPGVADDELD KLTQRGTRLD EAVMGHGLGL SIVKEIAEQY EIELKFDHST RLGGLRIELT FS
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