| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0647 |
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| Symbol | astD |
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| ID | 5080437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 718745 |
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| End bp | 720205 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640497772 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_001182176 |
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| Protein GI | 146291752 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0597241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATT ATATTCAAGG CCAATGGCAT ACTGGTAACG GTCATGACGT GACCTCAATC
AATCCTGCCA ATGGTGAAAC TATTTGGTGC GGAAAAACAG CTACCGCAGA GCAGGTTAAT
ACCGCGGTTG AGGCTGCGCG CGCTGCACAA TTTGATTGGT TTATGTTAGG TTTTGACGCA
CGTTTAGCCA TAGTTGAAGC GTATCGCAGC CAACTCGAAG CCAATAAAGC GGAACTGGCT
GAAACCATAG CCCAAGAAAC CGGTAAACCT CAGTGGGAAA CTGCAACCGA AGTCGGCGCC
ATGATAGGTA AAATTGCGCT ATCGGCTGCG GCTTACCATA AGCGCACGGG CACAGAAGCC
AATGATACGC CAGCCGGACG CGCCGTTATT CGCCATAAAC CCCACGGTGT TGTAGCTGTC
TTCGGTCCTT ACAACTTCCC CGGTCATTTG CCTAATGGTC ATATAGTGCC TGCGTTACTT
GCGGGTAATA CGGTGATTTT TAAACCCTCT GAATTGACGC CTAAAGTGGC CGAGTTGATG
GTCAAGCTTT GGGATAAAGC GGGTTTACCT GCGGGGGTTA TCAACTTAGT TCAAGGTGAA
GTGGATACGG GCAAGGCGTT AGCCTCACAT CCTCAGATCG ATGGTTTGTT TTTTACGGGC
AGTTCACGTA CAGGACACCT ATTACACCAA CAATATGCGG GTCATCCTGG CAAAATTTTA
GCACTTGAGA TGGGTGGCAA TAATCCACTG ATCATCAAAG GGGTACAGGA TATTAAGGCT
GCAGTGCACG ATATTCTGCA GTCGGCTTAT ATCTCATCTG GCCAACGCTG CACTTGTGCA
CGCCGTTTAT ACGTTGAGCA AGGCGAGCAG GGTGATGCCC TGATTGCCCT GTTAGTCGAT
GCGGTTAAAC AGATTAAAGT CGGCCCTTGG AATGCGCAGC CACAGCCATT TATGGGCTCA
ATGATTTCAG AAACTGCCGC CAAAGGTATG GTTGCGGCGC AAGCCAATCT ACTCGATTTA
GGCGGTAAAG TGCTCGTTGA ATTAACGCAT TTACAAGCAG GAACGGGCTT AGTCTCTCCT
GGCCTTATCG ATGTAACTGC AATTGATGTA TTGCCGGATG AAGAATACTT TGGGCCTCTA
TTGCAGTTGG TGCGCTATGG CGATTTCGAT CAGGCGATCA AACTGGCTAA CCAAACGCGT
TATGGTTTGT CTGCGGGATT ACTTGCCGAT AGCCGTGAAG ATTATGACTA TTTCCTCGCG
CGTATTCGTG CAGGCATTGT TAACTGGAAC AAACAAATCA CAGGCGCATC GGGCGCGGCG
CCTTTTGGTG GCGTAGGGGC ATCGGGTAAC CACAGGGCGA GTGCTTTCTA TGCCGCCGAT
TACTGTGCTT ACCCCGTTGC TTCGGTCGAG GCTGATGCCG TGAGTTTACC CGCGACACTA
AGCCCAGGTT TGAGCTTGTA A
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| Protein sequence | MTHYIQGQWH TGNGHDVTSI NPANGETIWC GKTATAEQVN TAVEAARAAQ FDWFMLGFDA
RLAIVEAYRS QLEANKAELA ETIAQETGKP QWETATEVGA MIGKIALSAA AYHKRTGTEA
NDTPAGRAVI RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNTVIFKPS ELTPKVAELM
VKLWDKAGLP AGVINLVQGE VDTGKALASH PQIDGLFFTG SSRTGHLLHQ QYAGHPGKIL
ALEMGGNNPL IIKGVQDIKA AVHDILQSAY ISSGQRCTCA RRLYVEQGEQ GDALIALLVD
AVKQIKVGPW NAQPQPFMGS MISETAAKGM VAAQANLLDL GGKVLVELTH LQAGTGLVSP
GLIDVTAIDV LPDEEYFGPL LQLVRYGDFD QAIKLANQTR YGLSAGLLAD SREDYDYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASVE ADAVSLPATL
SPGLSL
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