| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0639 |
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| Symbol | |
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| ID | 5080429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 708241 |
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| End bp | 709608 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497764 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001182168 |
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| Protein GI | 146291744 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00996628 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAACA ACGGGCTTTC AGGTACTGAG AAAAAAGTCG CGTTTTCTTT AGCCAGTGTA
TTTGGTTTAC GCATGATGGG CTTATTTATG ATCATGCCCG TCTTTGCGCT TTATGGTCAG
CACCTCGAAG GTTTTTCGCC TCTGTGGGTG GGTATTGCTA TCGGCGCCTA TGGTCTGACT
CAAGCCGTGC TGCAAATCCC TATGGGGATT TTATCTGACA AGTATGGTCG CAAGCCGATT
ATTCTTGGTG GCTTAGTGTT GTTTGCTGTC GGTAGTGTTA TCGCAGCTAA TGCAGATACA
ATTTATGGCG TTGTGTTTGG CCGAGCAGTG CAGGGGATGG GCGCGATTGC AGCCGCAGTA
CTGGCGCTTG CAGCAGATTT AACCCGTGAT GAACAACGTA CTAAGGTGAT GGCGATCATC
GGCATGTGCA TCGGGCTATC CTTTGCCCTG TCTTTGCTAA TGGGGCCGAT AGTCGCGCAG
CATCTTGGTT TGACTGGATT ATTTTGGTTA ACGGCAGTAT TAGCGATTGT GGGTATGCTG
TTGATCCAAT TTTTAGTGCC TAATCCCATC ACTCAGGCAC CCAAGGGAGA TACTTTAGCC
ACTCCCGCTA AGCTCAAACG TATGTTTCTT GAGCCGCAAT TATTTAGGCT TAACGCTGGG
ATTTTTATCC TGCATTTAGT GCTTACCGCT GTATTTGTGG CCTTACCGCT AGATCTGGTT
GATGCGGGGC TGGTTAAAGA AAAACATTGG ATGCTGTATT TTCCCGCTTT CGTGGGCGCA
TTTATTTTAA TGGTGCCGTT AATCATCATT GGGGTTAAGC GTAAGAATAC TAAAGCCATG
TTCCAAATTG CGCTGGTGAT CATGATATGT TCATTGGCTG GTATGGCAAT ATTTGCCTGT
AATCTATGGG CTTTGAGTGC GGCGGTATTA TTGTTTTTTA CTGGTTTTAA CTATCTCGAG
GCATCATTAC CGAGCTTAAT TGCTAAATTC TGTCCCGTAG GGGAGAAAGG TTCTGCCATG
GGGGTATATT CCACAAGCCA ATTCTTAGGG GCATTTTGTG GTGGTATGCT CGGTGGCGGT
GCTTTTCAGC TCGTGGGCGC CGTCGGGGTC TTTATTGTTG CTGTGATCTT AATGTCTATA
TGGTTATTCC TGACATTAGG CATGCAAAAT CCTGTGCTGT TAAAGAGTTA CACCTTAGAA
GCCGAAGTAA AAGATAAGGC GCAAGCGCGC GATATGGCAA CCCAGTTATC GCAATTAATG
GGTGTTGTTG AAGCCATAGT TGTGCTGGAC GATAAGGTGG CTTATCTCAA GGTAGACGAG
CATTTCGATT TAAGAGAAGC CCGAGCTGTG TTAGGCTCTG CTCAATAA
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| Protein sequence | MGNNGLSGTE KKVAFSLASV FGLRMMGLFM IMPVFALYGQ HLEGFSPLWV GIAIGAYGLT
QAVLQIPMGI LSDKYGRKPI ILGGLVLFAV GSVIAANADT IYGVVFGRAV QGMGAIAAAV
LALAADLTRD EQRTKVMAII GMCIGLSFAL SLLMGPIVAQ HLGLTGLFWL TAVLAIVGML
LIQFLVPNPI TQAPKGDTLA TPAKLKRMFL EPQLFRLNAG IFILHLVLTA VFVALPLDLV
DAGLVKEKHW MLYFPAFVGA FILMVPLIII GVKRKNTKAM FQIALVIMIC SLAGMAIFAC
NLWALSAAVL LFFTGFNYLE ASLPSLIAKF CPVGEKGSAM GVYSTSQFLG AFCGGMLGGG
AFQLVGAVGV FIVAVILMSI WLFLTLGMQN PVLLKSYTLE AEVKDKAQAR DMATQLSQLM
GVVEAIVVLD DKVAYLKVDE HFDLREARAV LGSAQ
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