Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0632 |
Symbol | |
ID | 5080422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 698197 |
End bp | 699309 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640497757 |
Product | TonB family protein |
Protein accession | YP_001182161 |
Protein GI | 146291737 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACACG GAAAAATGCT GCCAATCGCC TGTCTTCTTG CCCTCACTTT AGGCACTTCT CTTAGCGTGC ATGCCTCAGA AAATAGCTTT GCCAAAGCCT ATAGTGACTA TCAAGCTGCC GTTGAAAAGG GCGATGCCGC GAATATTGAA GCGAGTGCTA AAACCGCTTA TCAACTCGGC GAAGCTCAAT ATGCCAAGGA CAGTATCGAC TTAGCGAATC TCGCCATAAA CTGGGCCAGC GCAATAGAAA AGCAAGTTGC ACCCTACCCA TTTACAGAAA AAAATCTAGT ACAAACTGCC AAGGCGAATG AGCTATATCA AATCGCATTA GCAAACTATA AAGTCCATTA CGGCAAAGAG GCACTGGAGC TTATCGATCC CTTGCTAGGA TCTGCTACAA CCGAGGGCAA AGCTAAGGTT GCAAAAGATT ACCTGCAAGC AGCAATTGAT ATCGCAGAAA AATCGGATAA TAAAAAACTC ATAGCCGATG TAAAAATGGC TGCCTTCAAT CGCTTATCCA ATACTGAGCT ATACACCAAA AGCATAAGAA ACTATGCCTT CGATGCCTAT GATATTTATA AAGAAATTCT TCCCGAAAAT GCATTAGATA GAGTCAAGGC AACCTATGTG GTGGGTGCCG TTGAGTATGC AGAAAAGCAT GATGACAAAG CGATTCCATT GCTTTTAGAA GTCGTTAAGC AGTTTGAAGC CCTTAACTTT AGCCATCCCT ATGCCTTAAG TGCCCACGCT TATTTAGTCG AACTCTATGA GCGCCAAGGA AAGCGTGAGG AGTCCACCGC TCACTGTATT GCTATCGGCA AAATGCGCCC ATGGGCGGAT AAGCAAGAGC AACAACCGAT TTTTCGTACT AACCCTAAAT ATCCGTTATC CTATGCCCAA CAACGGAAAA GTGGCTGGGT TCAGCTTAAA TTTACCGTAG ATGAACATGG TTTCGTGAAA AATCCTGAAA TTTTAGCCTC TAATGGTGGC ATTTTATTTG AAAAAGAGAG CATTAAAGCC CTAGATAAAT GGCGTTACGC ACCAAAGTTT GAAAATGGTA AAGCGGTTGA AGCACAAACT AGCGTGCAAC TGGATTACAC CATAGATAAG TAA
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Protein sequence | MSHGKMLPIA CLLALTLGTS LSVHASENSF AKAYSDYQAA VEKGDAANIE ASAKTAYQLG EAQYAKDSID LANLAINWAS AIEKQVAPYP FTEKNLVQTA KANELYQIAL ANYKVHYGKE ALELIDPLLG SATTEGKAKV AKDYLQAAID IAEKSDNKKL IADVKMAAFN RLSNTELYTK SIRNYAFDAY DIYKEILPEN ALDRVKATYV VGAVEYAEKH DDKAIPLLLE VVKQFEALNF SHPYALSAHA YLVELYERQG KREESTAHCI AIGKMRPWAD KQEQQPIFRT NPKYPLSYAQ QRKSGWVQLK FTVDEHGFVK NPEILASNGG ILFEKESIKA LDKWRYAPKF ENGKAVEAQT SVQLDYTIDK
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