Gene Sputcn32_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0632 
Symbol 
ID5080422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp698197 
End bp699309 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content43% 
IMG OID640497757 
ProductTonB family protein 
Protein accessionYP_001182161 
Protein GI146291737 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACACG GAAAAATGCT GCCAATCGCC TGTCTTCTTG CCCTCACTTT AGGCACTTCT 
CTTAGCGTGC ATGCCTCAGA AAATAGCTTT GCCAAAGCCT ATAGTGACTA TCAAGCTGCC
GTTGAAAAGG GCGATGCCGC GAATATTGAA GCGAGTGCTA AAACCGCTTA TCAACTCGGC
GAAGCTCAAT ATGCCAAGGA CAGTATCGAC TTAGCGAATC TCGCCATAAA CTGGGCCAGC
GCAATAGAAA AGCAAGTTGC ACCCTACCCA TTTACAGAAA AAAATCTAGT ACAAACTGCC
AAGGCGAATG AGCTATATCA AATCGCATTA GCAAACTATA AAGTCCATTA CGGCAAAGAG
GCACTGGAGC TTATCGATCC CTTGCTAGGA TCTGCTACAA CCGAGGGCAA AGCTAAGGTT
GCAAAAGATT ACCTGCAAGC AGCAATTGAT ATCGCAGAAA AATCGGATAA TAAAAAACTC
ATAGCCGATG TAAAAATGGC TGCCTTCAAT CGCTTATCCA ATACTGAGCT ATACACCAAA
AGCATAAGAA ACTATGCCTT CGATGCCTAT GATATTTATA AAGAAATTCT TCCCGAAAAT
GCATTAGATA GAGTCAAGGC AACCTATGTG GTGGGTGCCG TTGAGTATGC AGAAAAGCAT
GATGACAAAG CGATTCCATT GCTTTTAGAA GTCGTTAAGC AGTTTGAAGC CCTTAACTTT
AGCCATCCCT ATGCCTTAAG TGCCCACGCT TATTTAGTCG AACTCTATGA GCGCCAAGGA
AAGCGTGAGG AGTCCACCGC TCACTGTATT GCTATCGGCA AAATGCGCCC ATGGGCGGAT
AAGCAAGAGC AACAACCGAT TTTTCGTACT AACCCTAAAT ATCCGTTATC CTATGCCCAA
CAACGGAAAA GTGGCTGGGT TCAGCTTAAA TTTACCGTAG ATGAACATGG TTTCGTGAAA
AATCCTGAAA TTTTAGCCTC TAATGGTGGC ATTTTATTTG AAAAAGAGAG CATTAAAGCC
CTAGATAAAT GGCGTTACGC ACCAAAGTTT GAAAATGGTA AAGCGGTTGA AGCACAAACT
AGCGTGCAAC TGGATTACAC CATAGATAAG TAA
 
Protein sequence
MSHGKMLPIA CLLALTLGTS LSVHASENSF AKAYSDYQAA VEKGDAANIE ASAKTAYQLG 
EAQYAKDSID LANLAINWAS AIEKQVAPYP FTEKNLVQTA KANELYQIAL ANYKVHYGKE
ALELIDPLLG SATTEGKAKV AKDYLQAAID IAEKSDNKKL IADVKMAAFN RLSNTELYTK
SIRNYAFDAY DIYKEILPEN ALDRVKATYV VGAVEYAEKH DDKAIPLLLE VVKQFEALNF
SHPYALSAHA YLVELYERQG KREESTAHCI AIGKMRPWAD KQEQQPIFRT NPKYPLSYAQ
QRKSGWVQLK FTVDEHGFVK NPEILASNGG ILFEKESIKA LDKWRYAPKF ENGKAVEAQT
SVQLDYTIDK