Gene Sputcn32_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0623 
Symbol 
ID5080413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp687731 
End bp688357 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content50% 
IMG OID640497749 
Productcytochrome c family protein 
Protein accessionYP_001182153 
Protein GI146291729 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000405798 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTA GAACATTCGT CATAGGTCTA ACCCTATGCA GCGGTTATGC AGCCGCCTCT 
GATGTGCCTT CTGGCAAACA ATCGATGGAC ATTATCCCAC CTGCAGCGCA ACTCTGTGTG 
TCTTGCCATG GGGCAGAGGG TGAGGGTATT GAACCACTCG GCCCTCGATT AGCGGGATTA 
TCTAAAGAAT ATATCTCGAC ACAATTGCAG CATTTCCAAG CGGGCGTTCG CCAAAACGCG 
ACCATGATGC CGATGGCAAT GACGCTCCAA GGTGACGGTA TTGAGCAAGT GTCGAGCTAT 
TTTTCGGCAA AGCCAACCAC TGACGTCAAG CCCGTTATCC GTGGTGAACA AGTTGTTTTT 
AATGACGACA CCGCTCGTTT AGCCTATCAA GGTGATTGGT CCCGTGGTTT ACCCGCCTGC 
GTGACCTGCC ATGGTCCTTC TGCATTAGGT GGCGGCTTAT TTCCTCGCTT AGCAGGTCAA 
CAGGCGAGTT ATATCAAAAC GCAATTATTG GCGTGGCAGT CGGGAACACG TAAAGGTGAT 
GTCGATGGCA TGATGGGGAG CGTCGCGAAT AAGCTCACCG TCGCCGAGAT TGATGCGTTA 
GCCAACTACT TTGCGAATTT AAAATAA
 
Protein sequence
MNIRTFVIGL TLCSGYAAAS DVPSGKQSMD IIPPAAQLCV SCHGAEGEGI EPLGPRLAGL 
SKEYISTQLQ HFQAGVRQNA TMMPMAMTLQ GDGIEQVSSY FSAKPTTDVK PVIRGEQVVF 
NDDTARLAYQ GDWSRGLPAC VTCHGPSALG GGLFPRLAGQ QASYIKTQLL AWQSGTRKGD 
VDGMMGSVAN KLTVAEIDAL ANYFANLK