| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0621 |
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| Symbol | |
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| ID | 5080411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 685334 |
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| End bp | 686392 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497747 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001182151 |
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| Protein GI | 146291727 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.602249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAG ATCAACAATT TGCCCGTTTA GTAAAATTTG CCATGTTTGG CTTTGTGATG
ATTTTTGGCT ATTTCATGCT TGCCGATACA GTGATGCCAT TGACACCTCA AGCCATGGCT
ACCCGTGTGG TGACTAAAGT GACACCACAG ATCAGCGGTA AAATTCAGAC GATAGCGGTG
ACGAACAATC AAGCCGTCAC TAAAGGTGAT TTATTGTTTC AAGTCGATCC CGCGCCCTAT
GAGCTCGCAG TATCACAAGC TAAATTGGCA CTAGAACAAG CTCGCCAAGA CAATGCCGAA
TTAGATGCTT CACTTATCGC AGCTAAAGCG GATGTGAATG CGAGTAAAGC AACTGCATTA
CAAAAACGCA GCGAAGCTAA ACGTCTGGAT GCCCTATATG CCACCCACGG CGTATCGCAG
CAACAGCGCG ATCAGGCCGA TAGTGATGCT GACGCCGCGG AAGCTAATTT ACTCGCCGCC
AATGCGCGCT TAGATAAACT TAAAGTGAGC CGTGGTGCTT ATGGTGAGGC AAATCTTAAA
GTTCGCCAAG CACTTAATAG CCTTGAACAG GCAGAACTGA ATCTATCTTA CACACAGATT
CGAGCCGATC AGGATGGTGT CGTCACTAAC TTGCAACTTG AGGTCGGCAG TTTTGCCACT
GTTGGTCAGC CACTGTTGGC CTTGGTCTCG GATAAAGTGG ATATTATTGC CGATTTTCGC
GAGAAAAGTC TGCGTGGGGT TAATGCCTCT TCAACTGCTT TGATTGCGTT TGATGGCGAA
CCCGGTCGTT TATATCGCGC TCAAGTCAGC AGCGTCGATG CGGGCGTGAG TGCAGGGCAA
TTCGATGCCA ATGGGCGTTT AGCCGCGCCG CAGGAGTCTG ACCGCTGGGT GCGTGATGCT
CAAAGGCTCA GATTGCACTT AATTTTGGAT GGCGATGGAA TGAAAGACCT ACCCTCAGGT
GCGCGCGCTA CGGTGCAGTT ACTTCCGGAT AATAGCCTGT TTGGTTTACT CGCTAAAGTG
CAAATTAAAG TGATAAGCCT GTTGCACTAT ATTTACTAG
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| Protein sequence | MTPDQQFARL VKFAMFGFVM IFGYFMLADT VMPLTPQAMA TRVVTKVTPQ ISGKIQTIAV
TNNQAVTKGD LLFQVDPAPY ELAVSQAKLA LEQARQDNAE LDASLIAAKA DVNASKATAL
QKRSEAKRLD ALYATHGVSQ QQRDQADSDA DAAEANLLAA NARLDKLKVS RGAYGEANLK
VRQALNSLEQ AELNLSYTQI RADQDGVVTN LQLEVGSFAT VGQPLLALVS DKVDIIADFR
EKSLRGVNAS STALIAFDGE PGRLYRAQVS SVDAGVSAGQ FDANGRLAAP QESDRWVRDA
QRLRLHLILD GDGMKDLPSG ARATVQLLPD NSLFGLLAKV QIKVISLLHY IY
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